Clone Read LE_HBa0050N16_SP6_11022

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0050N16_SP6_11022
Primer
SP6
ID from Seq. Facility
LE_HBa_050_N16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
746 trimmed for vector and quality, 874 raw
Genbank Accession
Sequence
>LE_HBa0050N16_SP6_11022 (raw untrimmed)
AAAGTGCTNTTCNTTCTCTAGTGACTCTCNNAAAACATAATTAGGGATTCCGGACTTACTAGCGTGAGGAAACCCATGTGGGAACCGAACTTACTAACAT
AAGACCTCCACCTTATTTACATTCCCTTTCGGTGCTAAAAAATTATTCTTTTTAGTAATCATGTTATTTCCTCATATAATTTCACCTTAGTGTCTTCTCG
AACCCTATGTAAACATCTCATCATATCTAGCTCATAGGTTATCACAAGTGAGAACAATCCTTTCACTTTAGACACCACTTCATAAATGAGTAAACCTTTC
ATTTAACACGTTATTGTAATCATAAGAAACTACTTTCAATCATACAATAATCTATCATAAAATACATACATACATAATTATGTCTAATTCAATTCCTTTG
GGTTAAGAATGTGGAATTTCTAGCATAAACACCACAACCACACATTAGACATAGGAGCATTACTATCTAACTCATAATTCACAATTGAATCCAAGAAGAA
CCAATCAACATACCTCATTTCCCTTCAAAGAACCTTCATAAATACATAACCAACTGCATAAACAAGGTAAATTCAAGAAGCAATTATATAATTAACAACA
ATGTAGTCAATCTACATGTTCATAATCTTCACAGTTCACCATATCAATTCAAGGTTTTCATGAAATTGGGGGAAAGACATGGGTCTAGGGACATATCATA
GGAAATAACCAATTAACCATATATATACACTTAAACAACCTTAATTCATCATAGTTTATCACAATTGTTTCATAATTTTATTTTTCAAAGAAGAGTCATG
TAGAAGAAAACCCTAGATTTGGGGATTTAGAAATCATCCTTTTGGAGGGACCTTTTTTGGAAAAGAATACGAAA
>LE_HBa0050N16_SP6_11022 (trimmed for quality and cloning vector)
ACATAATTAGGGATTCCGGACTTACTAGCGTGAGGAAACCCATGTGGGAACCGAACTTACTAACATAAGACCTCCACCTTATTTACATTCCCTTTCGGTG
CTAAAAAATTATTCTTTTTAGTAATCATGTTATTTCCTCATATAATTTCACCTTAGTGTCTTCTCGAACCCTATGTAAACATCTCATCATATCTAGCTCA
TAGGTTATCACAAGTGAGAACAATCCTTTCACTTTAGACACCACTTCATAAATGAGTAAACCTTTCATTTAACACGTTATTGTAATCATAAGAAACTACT
TTCAATCATACAATAATCTATCATAAAATACATACATACATAATTATGTCTAATTCAATTCCTTTGGGTTAAGAATGTGGAATTTCTAGCATAAACACCA
CAACCACACATTAGACATAGGAGCATTACTATCTAACTCATAATTCACAATTGAATCCAAGAAGAACCAATCAACATACCTCATTTCCCTTCAAAGAACC
TTCATAAATACATAACCAACTGCATAAACAAGGTAAATTCAAGAAGCAATTATATAATTAACAACAATGTAGTCAATCTACATGTTCATAATCTTCACAG
TTCACCATATCAATTCAAGGTTTTCATGAAATTGGGGGAAAGACATGGGTCTAGGGACATATCATAGGAAATAACCAATTAACCATATATATACACTTAA
ACAACCTTAATTCATCATAGTTTATCACAATTGTTTCATAATTTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.920145
Expected error %
0.0318661
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0050N16
Clone
Clone name
hba-50n16
LE_HBa0050N16
C10HBa0050N16
P050N16
Clone type
BAC
Contamination
none
Estimated length
60,757
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found