Solanum lycopersicum polypeptide Solyc08g077420.2.1
 Polypeptide details
|
| Name | Type |
Length
1,275
|
Organism |
|
Description
polypeptide feature inferred from GFF3 feature
|
|
Location(s)
SL2.50ch08:61276958..61289401
|
|
GFF source
ITAG_eugene
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| Polypeptide sequence
| translated polypeptide sequence |
>Solyc08g077420.2.1 ATP dependent helicase (AHRD V1 **-* A8NEE6_COPC7); contains Interpro domain(s) IPR018999 RNA helicase UPF1, UPF2-interacting domain
MDSQGNSLYDTASQPDTGNDVYTFLEFNTQGEEFDYPEFHELSQPIRSSAWPTPSDSLVSEVPDRPQSSSDASQASGKSRGGDGGRSRSSSSSKISSNKAAAVAVDALAAGMSGLNFEETGDDENFEYGKGDFAVEHACKYCGVTNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNVNALKDMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKIEELWKTNPDANLEDLEKPGVDDEPQPVGLKYEDAYQYQNIFAPLIKLEADYDKMMKESQSKDNLTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDVTHGLSVDFVWKSTSFDRMQTAMKTFAVDETSVSGYIYHHLLGHEVEMQMIRNALPRRFGAPGLPELNASQVFAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSGDEKKYKALKRATEREIAQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAAEPECLIPLVLGAKQIVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTINERQSLGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKLVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGGGPGIVPSDNYGSPASSNPNADRRSSRSRGSYMAPRPSNGTHRPGVYPSGYPMPRVPISPYHGGLPQPYAIPARGAIQGPVGAVPHVPQLGSRGFGAGRGNANAPIGSHLSHQQASQQPIGSHGPNFNFSALENPNSQPSGGPLSQPGYASNMAVQGPSQTFRDGFSMGGMSQDFLGDDFKSQGSHVSYHVADFSTQASQSGYAVDYVNQGAQAGFPGNYLNRNSQAGYSRFGSGNEFMSQDYMTYGSQGLFTQAGYSDPSQEDSSQNHFGMSNANPLHSQSLLNPLYSQPFGHYNTQPLNMQSSQPQQPQAPQVQGSQNQKLHYNG*
MDSQGNSLYDTASQPDTGNDVYTFLEFNTQGEEFDYPEFHELSQPIRSSAWPTPSDSLVSEVPDRPQSSSDASQASGKSRGGDGGRSRSSSSSKISSNKAAAVAVDALAAGMSGLNFEETGDDENFEYGKGDFAVEHACKYCGVTNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNVNALKDMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKIEELWKTNPDANLEDLEKPGVDDEPQPVGLKYEDAYQYQNIFAPLIKLEADYDKMMKESQSKDNLTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDVTHGLSVDFVWKSTSFDRMQTAMKTFAVDETSVSGYIYHHLLGHEVEMQMIRNALPRRFGAPGLPELNASQVFAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSGDEKKYKALKRATEREIAQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAAEPECLIPLVLGAKQIVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTINERQSLGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKLVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGGGPGIVPSDNYGSPASSNPNADRRSSRSRGSYMAPRPSNGTHRPGVYPSGYPMPRVPISPYHGGLPQPYAIPARGAIQGPVGAVPHVPQLGSRGFGAGRGNANAPIGSHLSHQQASQQPIGSHGPNFNFSALENPNSQPSGGPLSQPGYASNMAVQGPSQTFRDGFSMGGMSQDFLGDDFKSQGSHVSYHVADFSTQASQSGYAVDYVNQGAQAGFPGNYLNRNSQAGYSRFGSGNEFMSQDYMTYGSQGLFTQAGYSDPSQEDSSQNHFGMSNANPLHSQSLLNPLYSQPFGHYNTQPLNMQSSQPQQPQAPQVQGSQNQKLHYNG*
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this polypeptide |
| Related features
|
| Features this polypeptide derives from |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| mRNA | Solyc08g077420.2.1 | SL2.50ch08:61276784..61289874 | 4,473 | + | n/a |
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