Solanum lycopersicum mRNA Solyc11g009080.1.1

mRNA details  
Name
Solyc11g009080.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g009080.1.1
Length
1,536
  
Description
Phospho-2-dehydro-3-deoxyheptonate aldolase 1 (AHRD V1 ***- B6TUB8_MAIZE); contains Interpro domain(s) IPR002480 DAHP synthetase, class II
Location(s)
SL2.50ch11:3200299..3203598
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0009073
Length
3300
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g009080.1.1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1 (AHRD V1 ***- B6TUB8_MAIZE); contains Interpro domain(s) IPR002480 DAHP synthetase, class II

ATGGCTTTATCAAACACCTTATCATTGTCATCATCAAAATCCCTTGTTCAATCTCATCTGCTCCATAATCCTACACCCCAACCTCGTTTTTCCCTTTTTCCGACCACCCAACATGGGCGGCGCCACCCTATCTCCGCCGTACACGCGGCGGAGCCATCCAAGACTGCAGTTAAGCAAGGAAAATGGAGTCTTGATAGCTGGAAAACAAAGAAAGCTTTACAACTTCCTGAATACCCAGATGAGAAAGAACTTGAATCGGTGCTTAAAACACTTGAAATGAATCCACCCCTTGTGTTTGCTGGTGAGGCAAGGAGTTTGGAAGAGAAGCTTGGTGAGGCTGCATTGGGGAAAGCTTTTTTGTTACAAGGGGGAGACTGTGCTGAGAGTTTTAAGGAGTTTAATGCCAATAATATTCGTGATACTTTCAGGATTTTGCTTCAGATGAGTGTTGTTCTTATGTTTGGTGGACAAGTTCCTGTCATTAAGGTTGGAAGAATGGCCGGTCAGTTTGCAAAACCAAGATCAGATCCGTTTGAGGAGATAAATGGAGTGAAGCTACCAAGTTACAAGGGTGACAATATCAATGGTGATACGTTCGATGAGAAGTCAAGAATTCCAGATCCTCATAGGCTTATTAGGGCATACATGCAATCTGCTGCGACTCTTAATCTTCTTAGAGCTTTTGCTACTGGAGGTTATGCTGCAATGCAGAGGGTCACTGAATGGAATCTTGATTTTGTGGAGAACAGTGAACAGGGAGATAGGTATCAGGAACTAGCTCACAGGGTTGATGAAGCCTTAGGATTCATGGCTGCTGCTGGACTCACAGTTGACCACCCTATCATGTCAACAACTGATTTCTGGACATCCCATGAGTGCTTGCTTCTTCCTTATGAACAAGCACTTACAAGAGAGGATTCAACTTCTGGTCTTTTCTACGATTGTTCTGCTCACATGGTTTGGGTTGGGGAAAGAACCAGGCAACTAGACGGTGCTCATGTCGAGTTTTTGAGAGGAGTTGCGAACCCTCTTGGAATAAAGGTGAGTCAAAAAATGGATCCAAAAGAGCTAATTAAGCTCATTGACATCCTGAACCCTGCCAATAAGCCTGGAAGAATTACTGTAATTGTTAGAATGGGTGCCGAGAACATGAGAGTAAAACTTTCCCACTTGGTCAGGGCTGTACGGGGCGCTGGTCAGATTGTGACATGGGTTTGTGATCCAATGCACGGGAATACCATCAAGGCACCATGTGGACTCAAAACCCGTGCTTTCGATTCAATCCTGGCTGAGGTCCGAGCTTTCTTCGATGTGCATGAGCAAGAAGGAAGCCACCCTGGTGGTATTCACCTTGAAATGACAGGGCAAAATGTGACTGAATGCATTGGTGGATCACGAACAGTAACCTATGACGATTTGGGCTCTCGCTACCACACTCATTGTGACCCAAGATTGAATGCATCTCAGTCTCTTGAACTCTCCTTCATCGTAGCTGAGCGACTAAGAAGAAGAAGAATGTCATCTCAACGTCTGTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g009080.1.1SL2.50ch11:3200298..3203598512+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g009080.1SL2.50ch11:3200299..32035983,300+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g009080.1.1.1SL2.50ch11:3200299..3200784486+n/a
exonexon:Solyc11g009080.1.1.2SL2.50ch11:3201459..3201736278+n/a
exonexon:Solyc11g009080.1.1.3SL2.50ch11:3202016..3202292277+1
exonexon:Solyc11g009080.1.1.4SL2.50ch11:3202797..3203042246+n/a
exonexon:Solyc11g009080.1.1.5SL2.50ch11:3203350..3203598249+n/a
intronintron:Solyc11g009080.1.1.1SL2.50ch11:3200785..3201458n/a+n/a
intronintron:Solyc11g009080.1.1.2SL2.50ch11:3201737..3202015n/a+n/a
intronintron:Solyc11g009080.1.1.3SL2.50ch11:3202293..3202796n/a+n/a
intronintron:Solyc11g009080.1.1.4SL2.50ch11:3203043..3203349n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17971522%2Fdetails feature 17971522
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