Sol Genomics Network

Solanum lycopersicum gene Solyc11g009080.1

Name Solyc11g009080.1	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc11g009080	Length 3,300

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 1 (AHRD V1 ***- B6TUB8_MAIZE); contains Interpro domain(s) IPR002480 DAHP synthetase, class II

Location(s)

SL2.50ch11:3200299..3203598

GFF source

ITAG_eugene

From BOGAS: 1

Length: 3300

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc11g009080.1.1	SL2.50ch11:3200299..3203598	1,536	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc11g009080.1 SL2.50ch11:3200299..3203598
ATGGCTTTATCAAACACCTTATCATTGTCATCATCAAAATCCCTTGTTCAATCTCATCTGCTCCATAATCCTACACCCCAACCTCGTTTTTCCCTTTTTCCGACCACCCAACATGGGCGGCGCCACCCTATCTCCGCCGTACACGCGGCGGAGCCATCCAAGACTGCAGTTAAGCAAGGAAAATGGAGTCTTGATAGCTGGAAAACAAAGAAAGCTTTACAACTTCCTGAATACCCAGATGAGAAAGAACTTGAATCGGTGCTTAAAACACTTGAAATGAATCCACCCCTTGTGTTTGCTGGTGAGGCAAGGAGTTTGGAAGAGAAGCTTGGTGAGGCTGCATTGGGGAAAGCTTTTTTGTTACAAGGGGGAGACTGTGCTGAGAGTTTTAAGGAGTTTAATGCCAATAATATTCGTGATACTTTCAGGATTTTGCTTCAGATGAGTGTTGTTCTTATGTTTGGTGGACAAGTTCCTGTCATTAAGGTAATAAAGATTTGATTTTTATGAATCCCATTTTCAAATTCTGTGTTTTGATGTGCTAATTTGTTTATTTTGCTCATTGTTCCTGTGATTAAAGATTCGATTTTTATGAACCCCATTTTCAAATTATGTGTTTTGATGTGCTAATATGTGTGTTTTTCATATTATTCCTGTGATTAAGGTGATAAAGATTTGATTTTTATGACCCCATTTTCAAATTCTGTGTTTTGATGTGCTAATATGTGTGTTCTGCTGATTGTTCCTGTGATTAAGGTAATAAAGATTTGGTTTTTGTGAACCACATTTCCAAATTATGTGTTTTGATGTGCTAATATGTGTGTTCTGCTGATTCTTGATTCTTATTTTTATGTATCTGTGTGAAATTGTGCTCCTATTGTTCCTGACATGAGTTATGCTATATATTTTCTGTCAAGATAGAGTTCTGTTAGATTTCTAGATATTGTACAACTATAGTTGTTTCTCCATAACTTGGTTCATAAACTAAAGAAAACTCATATGGTTTTGATCTGAATGTGCATATATTTGTTTTTCTCAAGCGTGTTGAGTTGTCGACTGTTTAGGATCTTGGATAGATAAAATAAAGATCATTATAATGAGCTTCATGGTTGAAAAAAGATCACGGCTTTAAGCTTAAATTGTTACACGGTTAATTGTAGGTTGGAAGAATGGCCGGTCAGTTTGCAAAACCAAGATCAGATCCGTTTGAGGAGATAAATGGAGTGAAGCTACCAAGTTACAAGGGTGACAATATCAATGGTGATACGTTCGATGAGAAGTCAAGAATTCCAGATCCTCATAGGCTTATTAGGGCATACATGCAATCTGCTGCGACTCTTAATCTTCTTAGAGCTTTTGCTACTGGAGGTTATGCTGCAATGCAGAGGGTCACTGAATGGAATCTTGATTTTGTGGAGAACAGTGAACAGGGAGATAGGTATGACAAAATCACAATCTTTAATTAAGTTTTACGGCAGATCCTTTGATTCAGCAGTCAATCTTGTTTTATGTTGCTGCCAAATGTCTTTTAGGAGATGAAAAATTGGAATGAATTCCACAGTTATGCTTGGTGTATTATTTCAAAGCCTTCGCCTGAAGTGTCCGGCTTTGTCGTGACTACATGGAGTGTCAATTTCAGTTGCATATTCAGCCATTCAGATTGGATTAATCGGGCAATTTTAAGTCTAATATATTATATATTGGGAATGATTTGCAGGTATCAGGAACTAGCTCACAGGGTTGATGAAGCCTTAGGATTCATGGCTGCTGCTGGACTCACAGTTGACCACCCTATCATGTCAACAACTGATTTCTGGACATCCCATGAGTGCTTGCTTCTTCCTTATGAACAAGCACTTACAAGAGAGGATTCAACTTCTGGTCTTTTCTACGATTGTTCTGCTCACATGGTTTGGGTTGGGGAAAGAACCAGGCAACTAGACGGTGCTCATGTCGAGTTTTTGAGAGGAGTTGCGAACCCTCTTGGAATAAAGGTATGGATAGCTTCAAGCGTTGTAGTGCAATATGCTAACAGGAGTATTACTAATCAGCTTATTCATTACTCAGCGCATTAGACTGCTCGACTTATCTAAAAGTGAAGGAAAATCTTAATAGAGGAAAACAAAATTTAGAATTTATGCATCTCTAATCACTCCTTTTGCTTTCTGATTTCCGCTTATTTACTTGGGGCATAGATTTGAACTCGCCATTTTTTTCTCTCAAGCAAGAATCTTACCAGTGAACCAAAATTTGAGACCCATTTTGATGCGTAACCTTCTAAAGAACACCCATATTTATGTTTTATAAAATTCTTAATTTGCCTTGGAGTTGGACATCTATGGCTAGATTTCTTCATTTATGCATGATGTATCTATCTAAGTACCATTTTATGTTTGCTTCTCGTAGTATTAATCAAAATGATTTACCTGAGATCTTATCCAGTTTTCTTAGCCAATGTTGTTTACGTTAGTTGCCTAAAGATGGAAGTTTTTTTACAGGTGAGTCAAAAAATGGATCCAAAAGAGCTAATTAAGCTCATTGACATCCTGAACCCTGCCAATAAGCCTGGAAGAATTACTGTAATTGTTAGAATGGGTGCCGAGAACATGAGAGTAAAACTTTCCCACTTGGTCAGGGCTGTACGGGGCGCTGGTCAGATTGTGACATGGGTTTGTGATCCAATGCACGGGAATACCATCAAGGCACCATGTGGACTCAAAACCCGTGCTTTCGATTCAATCCTGGTATGTTTCATCTCTGCATCCTTTTTATGATTCTTAGAAGTTATATGGATAGAGATGGCTGCTTCCCCATGAAATGAGAGACATTTCTGCTAGATATTGACCAGTTCAGAGACTCTTAGTAGAAAGTGTGTGTAAATTTGCTTGCCTGGTGGTAGATTGTTTGCGGCTTAACGCCACAATAAAAACTGAATATAATTTTGTGGTCCAAAGTGTGTTGTTTAGACGGACTGAGATTTCAGTAGTTTCTGTTGTTTGATCTAAAAGTTTAATGCTCATATCTGAATGTCATGTTGTGCTAAACTGTCAGGCTGAGGTCCGAGCTTTCTTCGATGTGCATGAGCAAGAAGGAAGCCACCCTGGTGGTATTCACCTTGAAATGACAGGGCAAAATGTGACTGAATGCATTGGTGGATCACGAACAGTAACCTATGACGATTTGGGCTCTCGCTACCACACTCATTGTGACCCAAGATTGAATGCATCTCAGTCTCTTGAACTCTCCTTCATCGTAGCTGAGCGACTAAGAAGAAGAAGAATGTCATCTCAACGTCTGTAG

Download sequence region

Download sequence (3.3Kb)

Get flanking sequences on SL2.50ch11

mRNA Solyc11g009080.1.1

Ontology terms

terms associated with this mRNA

GO:0009073 – aromatic amino acid family biosynthetic process

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc11g009080.1.1	SL2.50ch11:3200298..3203598	512	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc11g009080.1	SL2.50ch11:3200299..3203598	3,300	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc11g009080.1.1.1	SL2.50ch11:3200299..3200784	486	+	n/a
exon	exon:Solyc11g009080.1.1.2	SL2.50ch11:3201459..3201736	278	+	n/a
exon	exon:Solyc11g009080.1.1.3	SL2.50ch11:3202016..3202292	277	+	1
exon	exon:Solyc11g009080.1.1.4	SL2.50ch11:3202797..3203042	246	+	n/a
exon	exon:Solyc11g009080.1.1.5	SL2.50ch11:3203350..3203598	249	+	n/a
intron	intron:Solyc11g009080.1.1.1	SL2.50ch11:3200785..3201458	n/a	+	n/a
intron	intron:Solyc11g009080.1.1.2	SL2.50ch11:3201737..3202015	n/a	+	n/a
intron	intron:Solyc11g009080.1.1.3	SL2.50ch11:3202293..3202796	n/a	+	n/a
intron	intron:Solyc11g009080.1.1.4	SL2.50ch11:3203043..3203349	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Z21792 (DAHP synthase 1 precursor)

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17971521%2Fdetails feature 17971521

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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