Solanum lycopersicum mRNA Solyc10g008560.2.1

mRNA details  
Name
Solyc10g008560.2.1
Type
mRNA
Length
2,063
Organism
Solanum lycopersicum
Description
DUF647 domain-containing protein (AHRD V1 **-- C1HAJ3_PARBA); contains Interpro domain(s) IPR006968 Protein of unknown function DUF647
Location(s)
SL2.50ch10:2665397..2673702
GFF source
ITAG_eugene
From BOGAS
1
Length
8306
Nb exon
13
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g008560.2.1 DUF647 domain-containing protein (AHRD V1 **-- C1HAJ3_PARBA); contains Interpro domain(s) IPR006968 Protein of unknown function DUF647

GTACGCCTCTTAAAAAAAATTAACTTTTCTGTGTTCCACATGTCCCACCACTTTTTCCTCTTAATCTCCGTTTTCGACATTACCAAAGCTCCGAATTTTCCTTCATGAAAACTTGGTTAATCTGAGATTCTCCTCTTCCATAACCAAAAAGTATAACAATGAAGCTTAAACCACCTCCGAATTCTTCTTCTTCATCATCTCAGACGCTAACAGCAACGGATGCTAAATTACTTGTTCGTGAAACCCTCCGTATTAGTGCTGATCTTGCTTCTTCTCCATATGTGACGTCGGTTGGTTCAGTACCGGAAAATGCTAGTTTTGGAGTGGTAGATCGGGAATTTGTTGATTCGAGTTTGAGATTGCTTTGTTGTGAAGAGATCGATGGTCGTAGATGGAAGTATTTTGCTGATGAGAGTGTAGGTTCTGAACAATTGAACTTGAAGAAGAAGAAGAAGAATGCGATTCGTGCTGTTAGTTTGCACTCTCCACAAGCTCCTGCTGAGGAGTTCATGTCATTCATACGATCCTATGTGGTTCCAGAAGGTTTTCCTGACAGTGTTACACCTTCTTATGTACCATACATGACATGGAGGGCACTAAAGCACTTCTTTGGTGGTGCAATGGGAGTTTTTACGACGCAAACACTCTTAAATTCAGTAGGAGTCTCCAAACATAGAACTACCCCTGGTGCTGTAGCCATTAACTGGATTCTCAAGGATGGTGCTGGTCGGGTGGGGAAGATGCTTTATGCACGGCAGGGAAAGAAATTCGATTATGATCTAAAACAGCTAAGGTTCGCGGGTGATCTTCTGATGGAGTTAGGAGCTGGTGTTGAACTGGTAACTGCTGTCGTGCCACAGTTTTTTCTTCCTTTAGCCTGTGCTGCGAATGTCGCAAAGAATGTAGGTGCTGTCACTTCTACTTCAACTCGTACTCCTATATATAAGGCCTTCGCTAAAGGGGAAAATATTGGGGATGTAACAGCTAAGGGGGAATGTGTTGGAAATCTTGCTGATTTACTTGGGACAGGATTAAGTATCTTGATTTCCAAAAGGAATCCATCCTTGGTCAAGACATTTGCATTCCTCTCATTTGGATATGTCTTCAGCTCTTACCGAGAGGTGAAATCTGTTGTGCTGCATACCCTGAACCGTGCAAGATTTACAGTAGCAGTAGAATCTTTCCTAAGGACAGGGAGAGTTCCAACACTGCAGGACGGAAATTCAAGGGAAGACATATTTAATTTTCCATGGAGACAGCACAGGCCTATTGTTCTTGGACCCAGATTTAAAGAAGCTTTCCAAGATCCAAACTCATATCTTTCTGTCAAGCCCATATTTGAGAAGGAGCATTATATAGTGACATACAATCCTTCCAAAGAAAACATATATGTGCTGCTCAAAGACCAAGCCAAGTCTGATGATGTACTGAAAGCAGCATTTCATGGCCATGTGCTTCTGCACATCATTCGTTCATGCACCAACAAACAGTCTTCCTCCAGGAAGCAACATGAAGATGAACATTCAGCATCCTTGCTATCAACTGCTGATCTTCAAGCTTATGTTGCAGAATCTTATAAAATGGTCTCTGCTTTATATATACCTTTCAAGAGCAAAGCTAAAGAACAGGGTTGGGTGATGTCGGAATCACTACTTAATCCTGGCCGAGCTCGGCTTTGTGAAATGACCACACATGATACATAGCTGTTGGAGTTGGTTGCAGAGGAACTACAAATAAATTTGTTTACTGAAACAATTATTTTGCATGGCGCCCGCCAGTGATGGGCATTGCAAGAGGTTTGTGCATCTATAGTGAAATGAGGTCAGAGATCTGAAGTAACTACCGGATATTTATCCTCATTGCAACTCACTACATGTTCTTTCGACTTTTTAGTACGATGGTTTACCTGTGCATCAGCATGTAGCTATTAGCGTAAGCAAGAAAGGTGCATTCCGCGAAAGAGATTTCAGTATACTTGTTTATTCTGCCATAGTCTTTTCTTCTTTCTTGCATATATATTTTCAGGGGGAGGCGGGTTCCCCTGCCGTTGAGATACGCTTCTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g008560.2.1SL2.50ch10:2665756..2673544515-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g008560.2SL2.50ch10:2665397..26737028,306-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g008560.2.1.1SL2.50ch10:2673200..2673702503-n/a
exonexon:Solyc10g008560.2.1.10SL2.50ch10:2667170..266723465-n/a
exonexon:Solyc10g008560.2.1.11SL2.50ch10:2666929..2667030102-n/a
exonexon:Solyc10g008560.2.1.12SL2.50ch10:2666672..2666854183-n/a
exonexon:Solyc10g008560.2.1.13SL2.50ch10:2665397..2665831435-n/a
exonexon:Solyc10g008560.2.1.2SL2.50ch10:2671968..267206699-n/a
exonexon:Solyc10g008560.2.1.3SL2.50ch10:2671750..2671863114-n/a
exonexon:Solyc10g008560.2.1.4SL2.50ch10:2670634..267070572-n/a
exonexon:Solyc10g008560.2.1.5SL2.50ch10:2670344..2670454111-n/a
exonexon:Solyc10g008560.2.1.6SL2.50ch10:2670134..2670253120-n/a
exonexon:Solyc10g008560.2.1.7SL2.50ch10:2667931..2668032102-n/a
exonexon:Solyc10g008560.2.1.8SL2.50ch10:2667743..266781573-2
exonexon:Solyc10g008560.2.1.9SL2.50ch10:2667326..266740984-2
intronintron:Solyc10g008560.2.1.10SL2.50ch10:2667235..2667325n/a-n/a
intronintron:Solyc10g008560.2.1.11SL2.50ch10:2667031..2667169n/a-n/a
intronintron:Solyc10g008560.2.1.12SL2.50ch10:2666855..2666928n/a-n/a
intronintron:Solyc10g008560.2.1.13SL2.50ch10:2665832..2666671n/a-n/a
intronintron:Solyc10g008560.2.1.2SL2.50ch10:2672067..2673199n/a-n/a
intronintron:Solyc10g008560.2.1.3SL2.50ch10:2671864..2671967n/a-n/a
intronintron:Solyc10g008560.2.1.4SL2.50ch10:2670706..2671749n/a-n/a
intronintron:Solyc10g008560.2.1.5SL2.50ch10:2670455..2670633n/a-n/a
intronintron:Solyc10g008560.2.1.6SL2.50ch10:2670254..2670343n/a-n/a
intronintron:Solyc10g008560.2.1.7SL2.50ch10:2668033..2670133n/a-n/a
intronintron:Solyc10g008560.2.1.8SL2.50ch10:2667816..2667930n/a-n/a
intronintron:Solyc10g008560.2.1.9SL2.50ch10:2667410..2667742n/a-n/a
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