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Solanum lycopersicum mRNA Solyc10g005520.2.1

mRNA details  
Name
Solyc10g005520.2.1
Type
mRNA
Length
1,807
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase dbp8 (AHRD V1 ***- B6JZZ3_SCHJY); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch10:426017..431988
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
5972
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g005520.2.1 ATP-dependent RNA helicase dbp8 (AHRD V1 ***- B6JZZ3_SCHJY); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

TTAAACCCAAATTAATAGATTTATTTGGGCTTTTCCAAATCGGCCCATTTATAGCTCTGAAAACTGAAAGCCGCCGTCTTCCATCTCTGTCTCCGGCACTGTCTTCTCTCCGATAACCGCAACTTTCTCAGAGTCTAACGGAATTTCTCTTTGAAACCCTAATAACAGTTACCTTAGTTGAGTTCTGTATACAATGGAAGAGGAAGTCCAAGTGGATGAGAATTTTCCCTTATTCTCCCGGAAAACTAAACCGGCCACAAAAAAACTCGTTCCTGCTCCAACCTCCATTGAAGAAACCCCAAAGCAGCTTGACAAGGAGACTAACTCTGGTCCAACCCCTAGTTATATCACCTTCTCTGACTTAGGCCTCGCCGGGTGGGCTGTACAGACCTGTAATGAGCTGGGCATGAAGAAACCCACTCCTGTACAATATCACTGTATACCCAGAATACTCTCCGGACAGGATGTGTTAGGTTTAGCTCAGACTGGTAGTGGAAAAACAGCTGCATTTGCATTGCCTATTCTTCATCGTTTAGCTGAAGATCCTTATGGGGTGTCCTGTCTTGTGGTTACTCCGACACGGGAGCTTGCGTTTCAGCTTGCCGAGCAGTTTCGGGCCCTGGGATCCTGCTTGAATTTGCGGTGTGCTGTGATTGTGGGAGGAATGGATATGATAACCCAGACTAAGACTCTGATGCAAAGACCTCATGTGGTGATAGCAACTCCCGGAAGGATTAAGGTTCTCATTGAACAGAATCCTGATATTCCCCCAGTTTTCAGCAAAACTAAGTTCCTTGTCTTGGATGAAGCAGATAGAGTTCTAGACGTAGGCTTTGAAGAGGAGTTGAGAGCAATCTTTCAGTGTTTGCCAAAGAATCGACAAACTCTTCTGTTTTCTGCAACAATGACTAGCAACCTGCAGACGCTACTTGAGCTTTCTGCAAACAAAGCATATTTCTATGAGGCATATGAGGGATTCAAGACTGTAGAATCACTTAAGCAGCAGTACATTTTTATTCCGAAAAATGTGAAGGATGTCTATCTGCAATACATTTTATCCAAAATCAAAGATATAGACGTTCGCTCTGCAATTATTTTTGTTTCCACCTGCAGGAGTTGTCAGCTTTTGGGCTTGTTGTTGGAAGAACTCGAAATTGATGCTGCTGCATTGCATTCATACAAGTCCCAGTCACTGAGGCTTTCTGCTCTTCATAAATTCAAATCTGGGCAGGTCCCAATATTGGTCGCTACTGATGTCGCGAGTCGTGGTTTAGACATTCCAACAGTTGATCTGGTGGTAAATTATGACATTCCAAGGTATCCACAGGATTATGTTCATCGTGTTGGACGTACTGCAAGAGCTGGACGAGGTGGACTTGCTGTCAGCTTTGTTACTCAGAATGATGTGGATCTCATTCATGAAATAGAAGCGGTGCTTGGGAAACAATTGGAGAAATTTGATTGTAAAGAGAATGAGGTGCTTGATGATATATCAAAGGTTTACAAGGCGAAGCGTGTTGCATCAATGAAGATGATGGATGATGGGTTTGAGGAGAAAGCAGAAAGTCGTAAAGCCCAGAAACAGAAAATGCAAAATGAGAGAAAGGGAAAGAGCAAAAAGCAGAAAAGAGAAAGAGTAACAAAAGATATAGAAGTTTGAGATCTCCTATATTTGTGGATAGCTTAGGAGAAGAGAGTTTTTTTTTTTTATGTAAAAGAGTTCTATTTTACACAAGTGGCTAAGATGTATATGATTTGGGTTTGGTTCGGATTTTTCAAATATTAAATCAAACCATTTGTATCAAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g005520.2.1SL2.50ch10:426163..431795489-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g005520.2SL2.50ch10:426017..4319885,972-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g005520.2.1.1SL2.50ch10:431199..431988790-n/a
exonexon:Solyc10g005520.2.1.2SL2.50ch10:430244..430566323-1
exonexon:Solyc10g005520.2.1.3SL2.50ch10:428368..428571204-1
exonexon:Solyc10g005520.2.1.4SL2.50ch10:428205..42828682-n/a
exonexon:Solyc10g005520.2.1.5SL2.50ch10:427036..42713499-n/a
exonexon:Solyc10g005520.2.1.6SL2.50ch10:426017..426325309-n/a
intronintron:Solyc10g005520.2.1.2SL2.50ch10:430567..431198n/a-n/a
intronintron:Solyc10g005520.2.1.3SL2.50ch10:428572..430243n/a-n/a
intronintron:Solyc10g005520.2.1.4SL2.50ch10:428287..428367n/a-n/a
intronintron:Solyc10g005520.2.1.5SL2.50ch10:427135..428204n/a-n/a
intronintron:Solyc10g005520.2.1.6SL2.50ch10:426326..427035n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17943512%2Fdetails feature 17943512
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