Solanum lycopersicum mRNA Solyc07g040990.2.1

mRNA details  
Name
Solyc07g040990.2.1
Type
mRNA
Length
1,936
Organism
Solanum lycopersicum
Description
Protein phosphatase 2C (AHRD V1 ***- A5A6P8_WHEAT); contains Interpro domain(s) IPR015655 Protein phosphatase 2C
Location(s)
SL2.50ch07:51485207..51488433
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008287
  • GO:0003824
Length
3227
Nb exon
5
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g040990.2.1 Protein phosphatase 2C (AHRD V1 ***- A5A6P8_WHEAT); contains Interpro domain(s) IPR015655 Protein phosphatase 2C

ATGCAAGATTGTTTTGAAACGGGAAAATTGATATATGATGAATCAGTATTACCTACATGTATTGACTTTGCTGGATATGAGCTGATCCCCAATACAACTAGCTTGCTGTCAGAACCTAACAAGTGCAAACTTCCTTGTTCGGTGTCGAATCATAGAGTGTCCAGGGACAAAGCTAACCTTTTTATGACAGTTGCTGATTGTCATGAAATCAGGATAGGGAAGAGTTTTTCTTCGACAGTTGTAGGTAATGGGAATTGTTTGATTGCTAGTGAGGTAGAAGATGGTAGATCTATGGACAACAATTTGATTTCACCAACTGATGAGCTTTTAGGAAATATGACTTGTTCTGATTCTCTAGTTGATGAGCGTGTCAGCATGCCTAACCAAGAATGTACAGGTTTGGAGGTTAAGGTTGGGAAAATGCCTCCTCGGGATGAGGAAAAGAAGGTTGGTGTATCCCAGATTCTGAGAAAGTCTTTTTCGTGTAGTTTGGCTAATGAGTTGGTTAATGAGTCACAACTTGTAAGTGATATTGTTTCCACCATGGTTGTGGGTGCTGAAGATTATAAAAGAAAATTATCACCATCCCATCTTGAGACCTCACAAGAGATAAAGATAAGCAGGCCAAATACCCTTTGTTTTGATTCTGTACCGCTTTGGGGGCTCATCACAATACAAGGAAAGAGGCCGGAGATGGAAGATACTGCTATAGCTTTACCAAAGTTTCTGAAAATCCCTTCCCATATTTTGACTGATGCGCCAGTTTCTCATGCCCTGAGTCAAACACTTACAGCCCATTTATATGGGGTTTATGATGGACATGGAGGCTCTCAGGTAGCTAATTATTGTCATGAGCGTCTCCATATGGTTTTAGCACAGGAGATAGATATCATGAAAGAGGATCCACATAATGGAAGTGTTAACTGGAAGGAGCAATGGTCAAAGGCTTTCTTGAATTGTTTCTGTAGAGTCGATGATGAGGTAGGGGGGTTCTGTAGTGAAACAGACGGGATTGAGCCTGACCTTTCAGTCATTGCTCCTGAAGCAGTTGGATCTACAGCTATAGTTGCTGTTGTTAGTCCAAGCCATATTATTGTTGCGAATTGTGGTGATTCTAGGGCAGTCCTTTGTCGGGGAAAACTGCCCATGCCATTAACCATTGACCATAAGCCAAATAGGGAAGATGAGTGTTCACGAATAGAAGAACTGGGAGGGAAGGTCATTAATTGGGATGGACATCGCGTTTCTGGTGTTCTTGCAGTTTCAAGGTCAATTGGTGATCGATATTTAAGGCCTTATGTGATTCCAGATCCAGAAATGATGTTTGTACCCCGAGCAAAAGAAGACGACTGTCTAATTTTAGCAAGTGATGGGCTATGGGATGTCTTGACAAATGAAGAAGCTTGTGATGTAGCACGGAGACGAATTCTTCTCTGGCACAAAAAAAATGGTGGTACTTTGAGTAGGGAAAGGGGTGAAAACGTAGATCCTGCTGCTCAAGATGCTGCAGAGTACTTGACTCGAGTTGCTCTCCAAAGGGGCAGCAGAGATAATATATCTGTGATTGTGGTCGATTTGAAGGCACAGAGGAAATTCAAGAAGAAAACATAACGCACTAAACCATCCTCGTATTTCATTTGTGGATGTAACATTGGGAAGTTATCCTACAGGATGATAATCATTGCAGATTTTAGCTATCCTTTTTAATTAGGCTGTTACCGTACATGATAGAAGTTATTCTGACAATAAAAATTCAGCAGAGTTGGTTCAAAGAACAAAGTATTGACTCCCAGCACAGATTATTTATGCAACTGTAGTGTAATGTTGTCTTCCCAGAACTCTCTCACTGAACAAACAACTGCACAAGTAGAAACAAGTTATGTGAGTGAGCTTGCTGTTTTTCATATATGTATCTATCCTTTTCTTGAGGTCTAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g040990.2.1SL2.50ch07:51485206..51488108537+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g040990.2SL2.50ch07:51485207..514884333,227+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g040990.2.1.1SL2.50ch07:51485207..5148522721+n/a
exonexon:Solyc07g040990.2.1.2SL2.50ch07:51485950..51486762813+n/a
exonexon:Solyc07g040990.2.1.3SL2.50ch07:51486914..51487249336+n/a
exonexon:Solyc07g040990.2.1.4SL2.50ch07:51487342..51487447106+n/a
exonexon:Solyc07g040990.2.1.5SL2.50ch07:51487774..51488433660+2
intronintron:Solyc07g040990.2.1.1SL2.50ch07:51485228..51485949n/a+n/a
intronintron:Solyc07g040990.2.1.2SL2.50ch07:51486763..51486913n/a+n/a
intronintron:Solyc07g040990.2.1.3SL2.50ch07:51487250..51487341n/a+n/a
intronintron:Solyc07g040990.2.1.4SL2.50ch07:51487448..51487773n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17876200%2Fdetails feature 17876200
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