Solanum lycopersicum mRNA Solyc06g065320.2.1
mRNA details
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| Name | Type |
Length
1,700
|
Organism |
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Description
Protein disulfide isomerase (AHRD V1 **-* Q5EUD3_MAIZE); contains Interpro domain(s) IPR013766 Thioredoxin domain
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Location(s)
SL2.50ch06:40731996..40737033
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0045454
- Length
- 5038
- Sifter term
- GO:0003756
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g065320.2.1 Protein disulfide isomerase (AHRD V1 **-* Q5EUD3_MAIZE); contains Interpro domain(s) IPR013766 Thioredoxin domain
AAAAAGTTCAAAATTTTTAAAGTGTGTAGAATAGATCCATCACTCATTTTTATTCAACTATACAATGATGAAAAATATGTCTTTTGTCATCCTCCTCTTAGTTTTGGTTTCACGGCCGTTCATCACGGCGGCGGAGTCGGAACAGCAGAAGCAACAGTTGGGCATAGACAGCGGTAAAGTATTGGAACTTGATGAATCTAACTTTGATGCTGCAATTTCCAGTTTTGATTATATTTTGGTCGATTTCTACGCTCCTTGGTGTGGTCACTGCAAACGACTTGCACCTCAGTTGGACAAAGCTGCTAGCATACTTGCTGATTTGAAGAAGCCCATAAGTATTGCAAAAATAGATGCTGACAAGTACAAACGTGTTGGTTCAAAATATGGCATTGATGGATATCCAACTTTAAAGATATTTATGCATGGTGTTCCAACAGAATATTATGGACCAAGAAAAGCAGATTTACTTGTACGATTCTTGAAGAAGTTTGTTGCTGCTGATGTGGCCATACTCAATTCTGATTCAGCCATTAGTGAATTTGTTGAAGCAGCCGGCACTAGTTTCCCTATATTTATAGGCTTTGGTTTGAATGAATCTGCCATATCACATTTTGCAGTAAAATACAAGAAGAGAGCATGGTTTTCTGTGGCAAAAGATTTCTCGGATAAGACCATGGAATTCTATGATTTTGACAAGGTACCTGCTTTGGTAGCTCGTCATCCAAACTATGATGAACAAAGCATCTTCTATGGCCCCTTTGAAGAAAATTTTGTTGAGGATTATATCAAGCAGAGTTTGCTCCCACTGACTTTGCCCATTACTGAAGAAACTCTGAGATTGCTGAAAGATGATGAGAGAAAAGTTATTCTAACAATTTTGGAAGATGAAACTGATGATAGGTCTAAGAAATTATTGAAGCTCCTGAAAGCTGCTGCATCTGCAAACCGCGACTTCGTGTTTGTTTTTGTTGGGTTCAAGCAATGGCAAGGGTTTGCTGAATCATTTGACGTTTCTAAGAAAACTAAGCTGCCAAAAATGGTTGTTTGGGATGGCGATGAGGAGTACTTTTCAGTTGTTGGCTCTGAGAGCGTTGAAGATGAAGATCAGGGGTCCCAAATTACACATTTTATTCAAGGATACAAAGACGGAAATATCATACAGAAACGTATTAGCTCTGGTTCTTTCATGGGTTTCATAAACTCAATGATAGGTTTGGGAACAGTGACCATCATAGTGTTTGTGGTTGCGGTGGTGATGATTATCCAGTCTTTGAAAGAGGAACCCTTAACTGTTGGTACAAGGGACGAGGGAGATCATCCAAGCAGCTCCACCTCTCAGACAGAAGCCAGACAACCACTTCGTTCTGGAGAGAAACAAGACAAGGAAGATTAAGTTTTACACCAGTCAGACCTCAGATAGTTAGCTTGAGAAATCCTCGACAGGAAAACCAAACTACACGTAGGTCTAAGAGTGCTGTTAAGTTTCATCCTCACAACGATCACAGCCCTTGTTTTCTTATTAAAGTTATTTGAACAACATACTGTAGGATTACTGTAACCAGAAGTGTGGAGGGAAGAGTTTGTGCTTCTATCTGTGTTATTGAATTTAACAAATGTGGAGGCAAATTTAATTTTAGCACTGTATAAAATGTGTTTGAAACAATCTTTTTTAGCTAATATCACTGCTTGTTTGATGATTA
AAAAAGTTCAAAATTTTTAAAGTGTGTAGAATAGATCCATCACTCATTTTTATTCAACTATACAATGATGAAAAATATGTCTTTTGTCATCCTCCTCTTAGTTTTGGTTTCACGGCCGTTCATCACGGCGGCGGAGTCGGAACAGCAGAAGCAACAGTTGGGCATAGACAGCGGTAAAGTATTGGAACTTGATGAATCTAACTTTGATGCTGCAATTTCCAGTTTTGATTATATTTTGGTCGATTTCTACGCTCCTTGGTGTGGTCACTGCAAACGACTTGCACCTCAGTTGGACAAAGCTGCTAGCATACTTGCTGATTTGAAGAAGCCCATAAGTATTGCAAAAATAGATGCTGACAAGTACAAACGTGTTGGTTCAAAATATGGCATTGATGGATATCCAACTTTAAAGATATTTATGCATGGTGTTCCAACAGAATATTATGGACCAAGAAAAGCAGATTTACTTGTACGATTCTTGAAGAAGTTTGTTGCTGCTGATGTGGCCATACTCAATTCTGATTCAGCCATTAGTGAATTTGTTGAAGCAGCCGGCACTAGTTTCCCTATATTTATAGGCTTTGGTTTGAATGAATCTGCCATATCACATTTTGCAGTAAAATACAAGAAGAGAGCATGGTTTTCTGTGGCAAAAGATTTCTCGGATAAGACCATGGAATTCTATGATTTTGACAAGGTACCTGCTTTGGTAGCTCGTCATCCAAACTATGATGAACAAAGCATCTTCTATGGCCCCTTTGAAGAAAATTTTGTTGAGGATTATATCAAGCAGAGTTTGCTCCCACTGACTTTGCCCATTACTGAAGAAACTCTGAGATTGCTGAAAGATGATGAGAGAAAAGTTATTCTAACAATTTTGGAAGATGAAACTGATGATAGGTCTAAGAAATTATTGAAGCTCCTGAAAGCTGCTGCATCTGCAAACCGCGACTTCGTGTTTGTTTTTGTTGGGTTCAAGCAATGGCAAGGGTTTGCTGAATCATTTGACGTTTCTAAGAAAACTAAGCTGCCAAAAATGGTTGTTTGGGATGGCGATGAGGAGTACTTTTCAGTTGTTGGCTCTGAGAGCGTTGAAGATGAAGATCAGGGGTCCCAAATTACACATTTTATTCAAGGATACAAAGACGGAAATATCATACAGAAACGTATTAGCTCTGGTTCTTTCATGGGTTTCATAAACTCAATGATAGGTTTGGGAACAGTGACCATCATAGTGTTTGTGGTTGCGGTGGTGATGATTATCCAGTCTTTGAAAGAGGAACCCTTAACTGTTGGTACAAGGGACGAGGGAGATCATCCAAGCAGCTCCACCTCTCAGACAGAAGCCAGACAACCACTTCGTTCTGGAGAGAAACAAGACAAGGAAGATTAAGTTTTACACCAGTCAGACCTCAGATAGTTAGCTTGAGAAATCCTCGACAGGAAAACCAAACTACACGTAGGTCTAAGAGTGCTGTTAAGTTTCATCCTCACAACGATCACAGCCCTTGTTTTCTTATTAAAGTTATTTGAACAACATACTGTAGGATTACTGTAACCAGAAGTGTGGAGGGAAGAGTTTGTGCTTCTATCTGTGTTATTGAATTTAACAAATGTGGAGGCAAATTTAATTTTAGCACTGTATAAAATGTGTTTGAAACAATCTTTTTTAGCTAATATCACTGCTTGTTTGATGATTA
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g065320.2.1 | SL2.50ch06:40732059..40736726 | 443 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g065320.2 | SL2.50ch06:40731996..40737033 | 5,038 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g065320.2.1.1 | SL2.50ch06:40731996..40732284 | 289 | + | n/a |
| exon | exon:Solyc06g065320.2.1.2 | SL2.50ch06:40733538..40733641 | 104 | + | n/a |
| exon | exon:Solyc06g065320.2.1.3 | SL2.50ch06:40734640..40735010 | 371 | + | n/a |
| exon | exon:Solyc06g065320.2.1.4 | SL2.50ch06:40735641..40735948 | 308 | + | 1 |
| exon | exon:Solyc06g065320.2.1.5 | SL2.50ch06:40736406..40737033 | 628 | + | 2 |
| intron | intron:Solyc06g065320.2.1.1 | SL2.50ch06:40732285..40733537 | n/a | + | n/a |
| intron | intron:Solyc06g065320.2.1.2 | SL2.50ch06:40733642..40734639 | n/a | + | n/a |
| intron | intron:Solyc06g065320.2.1.3 | SL2.50ch06:40735011..40735640 | n/a | + | n/a |
| intron | intron:Solyc06g065320.2.1.4 | SL2.50ch06:40735949..40736405 | n/a | + | n/a |
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mRNA details
mRNA details

