Sol Genomics Network

Solanum lycopersicum gene Solyc06g065320.2

Name Solyc06g065320.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc06g065320	Length 5,038

Description

Protein disulfide isomerase (AHRD V1 **-* Q5EUD3_MAIZE); contains Interpro domain(s) IPR013766 Thioredoxin domain

Location(s)

SL2.50ch06:40731996..40737033

GFF source

ITAG_eugene

From BOGAS: 1

Length: 5038

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc06g065320.2.1	SL2.50ch06:40731996..40737033	1,700	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc06g065320.2 SL2.50ch06:40731996..40737033
AAAAAGTTCAAAATTTTTAAAGTGTGTAGAATAGATCCATCACTCATTTTTATTCAACTATACAATGATGAAAAATATGTCTTTTGTCATCCTCCTCTTAGTTTTGGTTTCACGGCCGTTCATCACGGCGGCGGAGTCGGAACAGCAGAAGCAACAGTTGGGCATAGACAGCGGTAAAGTATTGGAACTTGATGAATCTAACTTTGATGCTGCAATTTCCAGTTTTGATTATATTTTGGTCGATTTCTACGCTCCTTGGTGTGGTCACTGCAAACGACTTGCACCTCAGGTCTATTTCCTTTACTCAGTGTTGTTTATTTCTTTTGAAAGTATATAGTAGTGACCTCTACTTTTAAGAGATCTTACTCGAATGTTGTAGAAGCAGTTAACTTTCTAAGTTACGATTGTAAATGTATAACTGCAATAGATAAGATTGGGTTTCTTTACTTCAACTGTGAGTAAATCAGGTATGCGAGATAATTGATCAAATTACTAAGCAGAAAAGCCAGTGAGTTGAATGAATTAAGATCTGAAAACTAGAATAAGCATATACCTAGTTTTATGATACGTTTGCTGGGATATGTAATCTAAATTAGTATTAAAAATAAACTTTATTTAACAATGGTGGTGTCTGGCCAGCTTGTATGTATCCACTATTCATATCCACCAGCACAACTACTGAGTGACTTAGGCCACCAAGCTTAGGCGAAGGTAGAAATCTGATCTTTTTTTTTTTTTGGTCTTTGTCTTTGTTGGGTTTTGAACTCTGATCTATGAGATTTGCACCCAGTTCATGGACCACTAGGCCATATACTTAGGTGCGAAATTAGACTAAAAAGCATAGACGGACTAATTTTGCACTGTTGATGACGTAGATTCAGAACCATAAGGTTTCATGTTATAATCCCATCAGAAGTAAAGAAACACAAGGTGATTTATTGCCATGCGTCCTAACCTTTGGCGGACAAAGAAAAAAACTACCAAAAAAGTTGTGTTTCTACCTTAATCGATAAAGGACTCTTCAATTAACTTCAAAAAGGTTGATTGCTTCTCCAATGAAAAGTTATCTAGACTCTATATTGATTATGTCATTTGGCCAATTCCTAGATTCGGATATCCATACATTTTGTGAAAGTAATTTTTACTATAAATGCTTCCTAAGTATGTTTTGTGCAACCATTGTTATCAGATCTTTCTTTAGGGGGGTAGTTGGTTGGCCGCATCATCAAAATAATCTCCTTATAAAGTCCACATACCCACATGACCAACACAGTGTCTGATTGAACTCATAAGAACAAATAATCTCCGATTAAGTAATGAACTGTTTGATTGATATGGTATTAAGCTTAAGATCACATATTTTTTGCGAGAATCTATGTTTATCTTATCTATCTCTGTTAGATGACTCCCCCACCCCACCCCCCACCCAACCCGCGCGGCGACCACCACGCTCAGATTCATTTAATATGCACATTTCTCTGCGCAAGAATTGAATTCTATGTGATGCGTGGTATCAATCTGATGAATTTAAGTTCGTTGCAGTTGGACAAAGCTGCTAGCATACTTGCTGATTTGAAGAAGCCCATAAGTATTGCAAAAATAGATGCTGACAAGTACAAACGTGTTGGTTCAAAATATGGCATTGAGTATGTGTACTTTTAGCCTTATCACTACATCGTTTTTCTGATATTAGTTTTACAATGTATGATCTGCTTCCGTTTAATAAGGTTTTCAAGAACTCAAAAGAAAGGAGGTATTCATTTGTTTTTCTGATAGTGATCACAACTGTTTGCTTTAAAATTGGATTTCATTTTTACTCTCTTAGGTTGACCATATAGGCAATTTGATTCGTATTCACCTGTGTAAAAGAAGATGATGTGTTTAAGTAAAGGAGTTACAAGTTACAACAGAAGTTTGAAAAGCAAAAAATGTAGATGCTGATAGGTCGTTGAGGGCCCAGCCACATCTATCTTTCTTTGTCCGTACGTCTGCCACGTCCTCTTTTTCCTTTCCTTTACCTTAAACCTCCATTAATTCTACCACTGATAATAATCTGATCTCCTTTGTTCCTGTCCTCTCTCAATCTTGGATCTCTCCTTCATCAATATTGTTCCTTCCCTCTCTTTGTCTAGGATGTACTTATATGGTGCTGATACGTCTGCATATGTGCTGGAGTAGGAAGTAGTATCTTTAGCTAAGTCTGTTGGAGAGGCAGAGTAGCCAGGTGACATACACGGAGAGAGTGTAATCAGGATAGTTGGAATTGATGGACAAAAGAGATGACTAGCTGGACGGGGATTGAGCTTTTTAAGTGGGAAGACTTGAATTTGGGTTCTGATCTACTTTCTGTACCGTCTCTATTTCTAATGAAGCTGGATTACCCCAAGAGTTCACCTGTCGTGTAATTCAATATGTTACTTTTTTTCTGCAAGAGAGCACTGAAAAGCGTCGAAGTGAAGATTTATTAGATGTTATTTGCTCTCCCTTAAACAAATAAAACAAATATAATGCTGAGCTGCAGGAACACATGCTTTATGGAAATTTGATTATTTCTCCCCTCGACTCTTGTTAATGAAATTAAAAGACACTGATCATTTTTATTTTATTAGAAGATATTGAATTTCTCTTTCTGATCTCAATGCAGTGGATATCCAACTTTAAAGATATTTATGCATGGTGTTCCAACAGAATATTATGGACCAAGAAAAGCAGATTTACTTGTACGATTCTTGAAGAAGTTTGTTGCTGCTGATGTGGCCATACTCAATTCTGATTCAGCCATTAGTGAATTTGTTGAAGCAGCCGGCACTAGTTTCCCTATATTTATAGGCTTTGGTTTGAATGAATCTGCCATATCACATTTTGCAGTAAAATACAAGAAGAGAGCATGGTTTTCTGTGGCAAAAGATTTCTCGGATAAGACCATGGAATTCTATGATTTTGACAAGGTACCTGCTTTGGTAGCTCGTCATCCAAACTATGATGAACAAAGCATCTTCTATGGCCCCTTTGAAGGTTAGCTTATCATCGCCTGTTATCTTAGGCTTTGGAAGTAATTAAAATCTCACTCACTTTATCAAAAAATTACTCATCTCTTCCTAGAAACTAATAAGAATTAATTATTTTTTTATCGCCTACAAAGGTCCTGAGAAAACCAGAATCTTGTTATATTTAAAGAAGTAACAGTACCACCTGCTCTGTATTTCAAAACTTGCTTTAATTCAATGATTGGCCCTTTATTTGTATTGTGTCACTTAAAAGCAGAAGTCAGCAACTCCAGATTCTGATGTGCTTAAATAATAGGGATCAATCATGAGCTAGTTGTAGTGCTTTCAAAAAGGAAGCATTCAAAAACATCAGTTGACTCTTATGATGAATTCTGATATGGTTTTGATTAGGTGGTTAAGTAATTGATTTGATTGCATGACTATAACCTTATATTATACTTTTCAGTTGATTAAATTGTTTTAGGCTTATTTATGAAAAAAGTTAAATAGCTTTAACTTCCAACCTGCCAACATTTGCTGTATTTTCTGTACTGCATGAAAAAACAAACTGATTTAAGAATTGAGCTGAAGTTGTGTTTTGGGGATTTCTGCGAAATAATGGTGAATATCTGAACCTTCTTCCTGCTATGGATCACAGAAAATTTTGTTGAGGATTATATCAAGCAGAGTTTGCTCCCACTGACTTTGCCCATTACTGAAGAAACTCTGAGATTGCTGAAAGATGATGAGAGAAAAGTTATTCTAACAATTTTGGAAGATGAAACTGATGATAGGTCTAAGAAATTATTGAAGCTCCTGAAAGCTGCTGCATCTGCAAACCGCGACTTCGTGTTTGTTTTTGTTGGGTTCAAGCAATGGCAAGGGTTTGCTGAATCATTTGACGTTTCTAAGAAAACTAAGCTGCCAAAAATGGTTGTTTGGGATGGCGATGAGGAGTACTTTTCAGTAAGTTCATTTACTTCTTTTTCTCTCCCTTTCCAGTTCCCCGCTAGGGATTGCATATTTGTCGACCCTTATCAAGTGTAGGAAATATACTTTATAGTTTGGAGTCTGGACTTTTTTCTTGTCTAACACGGCTAAAATATAGTGCTTTCAACTTATCGACTGAAGTGAACGATGAACTTTTCATTTTTGCTTAGTGTTCTGACTAAAATAAACAGCAGGGATAAACTGTACTTAACCGTACTTATTAATTGGTATCATTTCACTGCATGACACTTAATTATGTTGTTTCTCCAAGTCTGTGAGATGCCTTTTGTGAATAATATCTACCAGTAATTTTCAGTGGTTTATTAGAAGAGAGAGACATTATTTATACATAATCTACTTCTAGGTGAAGTGTCTTTTGACTAAATCACTATAAATTTAACGTAATGATTACAATTTTTTACTCATGCAACAGGTTGTTGGCTCTGAGAGCGTTGAAGATGAAGATCAGGGGTCCCAAATTACACATTTTATTCAAGGATACAAAGACGGAAATATCATACAGAAACGTATTAGCTCTGGTTCTTTCATGGGTTTCATAAACTCAATGATAGGTTTGGGAACAGTGACCATCATAGTGTTTGTGGTTGCGGTGGTGATGATTATCCAGTCTTTGAAAGAGGAACCCTTAACTGTTGGTACAAGGGACGAGGGAGATCATCCAAGCAGCTCCACCTCTCAGACAGAAGCCAGACAACCACTTCGTTCTGGAGAGAAACAAGACAAGGAAGATTAAGTTTTACACCAGTCAGACCTCAGATAGTTAGCTTGAGAAATCCTCGACAGGAAAACCAAACTACACGTAGGTCTAAGAGTGCTGTTAAGTTTCATCCTCACAACGATCACAGCCCTTGTTTTCTTATTAAAGTTATTTGAACAACATACTGTAGGATTACTGTAACCAGAAGTGTGGAGGGAAGAGTTTGTGCTTCTATCTGTGTTATTGAATTTAACAAATGTGGAGGCAAATTTAATTTTAGCACTGTATAAAATGTGTTTGAAACAATCTTTTTTAGCTAATATCACTGCTTGTTTGATGATTA

Download sequence region

Download sequence (5.0Kb)

Get flanking sequences on SL2.50ch06

mRNA Solyc06g065320.2.1

Ontology terms

terms associated with this mRNA

GO:0003756 – protein disulfide isomerase activity

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc06g065320.2.1	SL2.50ch06:40732059..40736726	443	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc06g065320.2	SL2.50ch06:40731996..40737033	5,038	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc06g065320.2.1.1	SL2.50ch06:40731996..40732284	289	+	n/a
exon	exon:Solyc06g065320.2.1.2	SL2.50ch06:40733538..40733641	104	+	n/a
exon	exon:Solyc06g065320.2.1.3	SL2.50ch06:40734640..40735010	371	+	n/a
exon	exon:Solyc06g065320.2.1.4	SL2.50ch06:40735641..40735948	308	+	1
exon	exon:Solyc06g065320.2.1.5	SL2.50ch06:40736406..40737033	628	+	2
intron	intron:Solyc06g065320.2.1.1	SL2.50ch06:40732285..40733537	n/a	+	n/a
intron	intron:Solyc06g065320.2.1.2	SL2.50ch06:40733642..40734639	n/a	+	n/a
intron	intron:Solyc06g065320.2.1.3	SL2.50ch06:40735011..40735640	n/a	+	n/a
intron	intron:Solyc06g065320.2.1.4	SL2.50ch06:40735949..40736405	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc06g065320

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17851332%2Fdetails feature 17851332

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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