Solanum lycopersicum mRNA Solyc05g008060.2.1

mRNA details  
Name
Solyc05g008060.2.1
Type
mRNA
Length
2,433
Organism
Solanum lycopersicum
Description
Auxin efflux carrier (AHRD V1 **** D6RT10_SOLLC); contains Interpro domain(s) IPR014024 Auxin efflux carrier, subgroup
Location(s)
SL2.50ch05:2482150..2485589
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016021
Length
3440
Nb exon
6
Sifter term
  • GO:0010329
  • GO:0009672
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g008060.2.1 Auxin efflux carrier (AHRD V1 **** D6RT10_SOLLC); contains Interpro domain(s) IPR014024 Auxin efflux carrier, subgroup

CATGTAATTTCACTCCTTTTTCTTCTTTCCTCTTCCACCAAAGAAAAGAAAAACAAAACAATTAAATTTTCTCATCAGTCCTTTTTAATCTCTCTCTGCAATTTGCTGCAGAATTCTTCTGCACCAGTACTGCAGTATCAACTGCAATACACACAGTGCTGCCTGCAGTTAAATAACGGTTTTTTCTTCTTCTTCGATTTGACAATTTTCTTCTCTTTTTTTGGCGAAAATGATCACTTGGCACGATCTGTATGTTGTGTTAACGGCAGTTGTTCCTCTGTATGTTGCTATGATATTAGCTTATGGTTCTGTTCGTTGGTGGAAGATCTTTTCTCCCGATCAATGTTCAGGGATCAACAGATTCGTAGCTATTTTTGCAGTTCCTTTGTTGTCTTTCCATTTCATAGCTATGAACAATCCATATGAGATGAATTTCCGTTTCATTGCGGCGGATTCGCTGCAGAAAGTGATTATGCTTGTTGTACTTTCATTATGGGCTAATTTAACTAAAAATGGTAGCCTTGAATGGAGTATTACCATTTTTTCACTTTCAACACTACCAAATACATTGGTGATGGGTATTCCTTTGTTAATTGCTATGTATGGTGAGTACTCTGGTAGTCTCATGGTACAAGTAGTGGTGTTGCAGTGTATCATTTGGTACACACTTTTGCTTTTTTTGTTCGAATATCGCGGTGCGAAAATGCTTATAATGGAGCAATTCCCAGAAACTGCTGCTTCCATTGTTTCGTTTAAAGTTGAATCTGATGTTGTATCTCTAGATGGACATGATTTTCTCGAAACAGATGCTGAAATTGGTCAAGATGGAAAACTGCATGTTACTGTGAGAAAATCGAATGCGTCCCGGAGATCGTTCGCTATGGATCATCGGCCGTCGAATCTCACCGGAGCTGAGATTTACAGTCTCAGTTCTTCGAGAAATCCGACTCCTCGAGGGTCTAATTTTAATCATAATGATTTTTACTCAATGATGGGATTTCCTGGAGGAAGATTATCCAATTTTGGTCCTGCAGATATGTATTCTGTACAATCGTCTCGGGGTCCGACCCCGAGACCATCTAATTTCGAAGAAAACTGTGCTCCGGGAGGTCTAGTTCAGAGTTCCCCGAGGTTCGGATACTTTCCGACGCAGCAGCCTGCGCCGGGATCTTATCCTGCCCCGAACCCCGAAATTGCATCCGCAGGGCCTAAAAGCACAAAACCTCAGCAGCCAAATGTACAAACGCAGAAGCAGGAAGTACAACAGCAACAGCAGCAGCACCAACAGCCAAATGCTAAAGCTAATAATCATGATGCTAAGGAACTTCACATGTTTGTATGGAGTTCGAGTAATTCTCCGGTGTCGGAGGCCGGTGGCCTCCATGTGTTCGGTGGCAATGATTTCAGTGCCAACGAACAATCGGGTCGATCCGATGGAGCTAAAGAAATTCGAATGTTGGTTTCTGATCATACTCAAAATGGAGATAGTAAAGCCATTCCGCAAATAGGGGAATTTGGTGGTGAGGATTTCACTTTTGGAGGTGCCAATGGTGGTGGAAAAGATGGCGATGAAGAAAAAGGCGAAAAAGAGGGACCCACTGGACTGACTAAACTAGGGTCTAGCTCTACATCGGAGCTACACCCCAAGCTCGCTGGAGTACAAGATGCTGGTATGGGAAAACAGATGCCTCCGGCTAGTGTTATGACTCGTTTGATCTTAATCATGGTTTGGCGTAAGCTTATTCGTAACCCAAACACGTATTCAAGCCTCATTGGTCTGATTTGGTCTCTAATCTCATTCAGATGGCATGTGCATATGCCCAAAATTATAGAGAAGTCAATCTCCATTCTCTCTGATGCTGGTCTTGGAATGGCTATGTTTAGCTTGGGTTTGTTTATGGCTCTTCAACCAAAAATCATTGCATGTGGTAACACAGTGGCTACATTTGCAATGGCTGTAAGGTTTCTAACTGGCCCAGCAGTTATGGCTGCTGCTTCAATTGCTGTTGGGCTACGTGGTACTCTTCTTCATGTAGCCATTGTACAGGCTGCATTGCCACAAGGGATTGTCCCATTTGTGTTTGCTAAGGAGTACAATGTTCATCCAGCTATTCTTAGTACTGCGGTTATTTTTGGGATGTTGATAGCGTTGCCAATTACATTAGTGTACTACATTATTCTTGGATTATAAGAATATATGCCAAGTGAAGAAAGGAGGAAAAAAATAGTGGGAATCATTAATGGTTTAATCAATTCATGGGATGAGAATTAATTAAAATTACTCATGAAAATTCCCAGATATTTGGAGCATTAGGACAAGAAATTTGACTTAAATTAGTTTTTGAAGCCTCCATTTGAAGAAAAAAAAAATATCAAAAATGTTGCAAAATTTAGAAAAAGAGGAGACAAGAAGGAGCAAAACATGGAAGCAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g008060.2.1SL2.50ch05:2482378..2485347654+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g008060.2SL2.50ch05:2482150..24855893,440+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g008060.2.1.1SL2.50ch05:2482150..24836421,493+n/a
exonexon:Solyc05g008060.2.1.2SL2.50ch05:2483783..2484092310+n/a
exonexon:Solyc05g008060.2.1.3SL2.50ch05:2484221..248430686+2
exonexon:Solyc05g008060.2.1.4SL2.50ch05:2484788..2484945158+1
exonexon:Solyc05g008060.2.1.5SL2.50ch05:2485106..248518277+2
exonexon:Solyc05g008060.2.1.6SL2.50ch05:2485281..2485589309+n/a
intronintron:Solyc05g008060.2.1.1SL2.50ch05:2483643..2483782n/a+n/a
intronintron:Solyc05g008060.2.1.2SL2.50ch05:2484093..2484220n/a+n/a
intronintron:Solyc05g008060.2.1.3SL2.50ch05:2484307..2484787n/a+n/a
intronintron:Solyc05g008060.2.1.4SL2.50ch05:2484946..2485105n/a+n/a
intronintron:Solyc05g008060.2.1.5SL2.50ch05:2485183..2485280n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17815377%2Fdetails feature 17815377
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