Solanum lycopersicum mRNA Solyc04g005490.2.1

mRNA details  
Name
Solyc04g005490.2.1
Type
mRNA
Length
1,937
Organism
Solanum lycopersicum
Description
Appr-1-p processing domain protein (AHRD V1 *--- D5EGM7_AMICL); contains Interpro domain(s) IPR002589 Appr-1-p processing
Location(s)
SL2.50ch04:326470..332708
GFF source
ITAG_eugene
From BOGAS
1
Length
6239
Nb exon
14
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g005490.2.1 Appr-1-p processing domain protein (AHRD V1 *--- D5EGM7_AMICL); contains Interpro domain(s) IPR002589 Appr-1-p processing

TAGAAGAGAGATTCAAAAAAGTGTAGCACAATATGTATCGCCCTGTGCCTATTACTACCCGAGGTGGGGAACCTACAGATAGTGGAGATCCTGTGGTGACGTTGGACCAAGTTCCACGTTGGAGTAATGCGGAATTTAGGTATGCACATGAGAATGAAGATCCTACTAATTCATGCTTTCCGGACCCCTTGGCATCTGCTTCTGGGTCTGAATTTAATGGTAGTGGCATAGTTTCCAAGTTTCCCATGGATCATGAGATTAACTCCAAGATATACTTGTGGAGAGGCGACCCCTGGAATCTCGAGGTAGATGCTGTTGTTAACTCTACTAATGAGAACTTAGACGAAGCTCACAGCAGCCCAGGATTGCATGCTTCAGCTGGACCTGGTCTTGCAGAAGAGTGTGCCACATTGGGAGGCTGCCGGACAGGAATGGCAAAAGTTACAAATGCTTATGATCTTCCTGCTAGGAGGGTCATACATACTGTTGGTCCCAAGTATGCTGTAAAATACCATATTGCTGCAGAGAATGCGCTAAGCCATTGCTATCGCTCTTGCTTTGAGCTTCTTATAGAAAATGGGCTGAAGAGCATTGCTATGGACTGTATATATACAGAAGCGAAAAGTTACCCACGAGAACCAGCTGCTCATGTGGCAATAAGAACTGTAAGGCGGTTCATTGAGAAACAGAAAGATAAAGTAGAGGCAATTGTTTTCTGTACTACTACATCACAAGATACGGAGATTTATAAAAGATTGCTTCCACTCTATTTTCCTCGGGATAAGCATGAGGAGGAAGTTGCCCTTCTAAAACTTCCTGCAGATGTTGGGGATGAAAATGGGGAGACAACTATAGATGAGCGTAAAATTAGGATAAAACCGTTACCAAATGTCAAAAAGTCCAATCCAAGGATTTCCCAGGCCTCTGTTGATTTGTCTGTCAGTAATGTTGGTTTGACCAGGAGTTCATCCTATTTGGATGCTTTTCTGGATCCTGCTTTTATGTCCCTGATCAAGGACCCAGATCAGCGACGGAAAGAACAATGGGAAAAAACTGCCCAAGCTCAAACTAGCTGGAACTTCTTTAAAATGTTTGGATATGGTGACGTCGCAGGACCTCCTTTGTCAGCTGCAGAAGAATACTCGCTTCATTCTAGATATATTGCAAAAGCAAATACTCTGAATTTTTCAGAAATTGCAGAAATGAAAATTGTCTACCGAGGAGGGGTTGACAGTGAAGGCCGTCCAGTAATGGTTGTTGTGGGGGCACATTTCCTGCTAAGATGTCTTGATCTGGAGAGATTTATTATCCATGTTGTAAAGGAATTTGAACCATTGATACAGAAACCTTACTCTATTGTGTACTTCCATTCTGCTGCAACTCTACAGATGCAACCAGATCTAGGATTAATGAAGAGGATACAACAAATTCTTGGTCGCAAGCACCGGCACAACCTTCATGCGATATATGTTCTTCACCCTACTTTTGGACTGAAGAGTGCAGTTTTTGGTTTACAACTCTGTGTGGATAATGTGGTATGGAAGAAAATAGTATATGTAGATCGTCTTCTGCAATTATTCCGCTATGTTCCTCGTGAGCAGCTGACTATTCCAGATTTTGTTTTCCAGCATGATTTGGAAGTAAATGGAGGGAAGGGCCTAATTGTGGATCCTAGAACCAAGTATGTTTATCAGAGACCATAGTCTCAAAACTTCATCCGATAAAAGAAGAAAATAGACGCTGTAGTAAGATTGTGGAATTTAAATTTGTTTGTACAGAGGCTGTAATTGTTTTGTGCAATATTAGCAGTGTATTTAGCTAACTTTGTCTGTAATTTGATTTATTTATGCAACCATATGTCCAGTCCTGTGCTAGCTAATGGCAATAAATTTCTTTGTTTCTGCAACATTTTCCCTTCTAGATATGTCATTTTAGTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g005490.2.1SL2.50ch04:326501..332474557+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g005490.2SL2.50ch04:326470..3327086,239+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g005490.2.1.1SL2.50ch04:326470..326804335+n/a
exonexon:Solyc04g005490.2.1.10SL2.50ch04:331150..33121768+1
exonexon:Solyc04g005490.2.1.11SL2.50ch04:331463..33153270+n/a
exonexon:Solyc04g005490.2.1.12SL2.50ch04:331646..33172075+1
exonexon:Solyc04g005490.2.1.13SL2.50ch04:331836..33192792+n/a
exonexon:Solyc04g005490.2.1.14SL2.50ch04:332399..332708310+n/a
exonexon:Solyc04g005490.2.1.2SL2.50ch04:327460..32753778+n/a
exonexon:Solyc04g005490.2.1.3SL2.50ch04:327775..32783056+n/a
exonexon:Solyc04g005490.2.1.4SL2.50ch04:328869..328988120+n/a
exonexon:Solyc04g005490.2.1.5SL2.50ch04:329319..32938971+1
exonexon:Solyc04g005490.2.1.6SL2.50ch04:329598..32969194+1
exonexon:Solyc04g005490.2.1.7SL2.50ch04:329805..330011207+2
exonexon:Solyc04g005490.2.1.8SL2.50ch04:330396..330647252+1
exonexon:Solyc04g005490.2.1.9SL2.50ch04:330888..330996109+1
intronintron:Solyc04g005490.2.1.1SL2.50ch04:326805..327459n/a+n/a
intronintron:Solyc04g005490.2.1.10SL2.50ch04:331218..331462n/a+n/a
intronintron:Solyc04g005490.2.1.11SL2.50ch04:331533..331645n/a+n/a
intronintron:Solyc04g005490.2.1.12SL2.50ch04:331721..331835n/a+n/a
intronintron:Solyc04g005490.2.1.13SL2.50ch04:331928..332398n/a+n/a
intronintron:Solyc04g005490.2.1.2SL2.50ch04:327538..327774n/a+n/a
intronintron:Solyc04g005490.2.1.3SL2.50ch04:327831..328868n/a+n/a
intronintron:Solyc04g005490.2.1.4SL2.50ch04:328989..329318n/a+n/a
intronintron:Solyc04g005490.2.1.5SL2.50ch04:329390..329597n/a+n/a
intronintron:Solyc04g005490.2.1.6SL2.50ch04:329692..329804n/a+n/a
intronintron:Solyc04g005490.2.1.7SL2.50ch04:330012..330395n/a+n/a
intronintron:Solyc04g005490.2.1.8SL2.50ch04:330648..330887n/a+n/a
intronintron:Solyc04g005490.2.1.9SL2.50ch04:330997..331149n/a+n/a
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