Solanum lycopersicum mRNA Solyc01g106080.2.1

mRNA details  
Name
Solyc01g106080.2.1
Type
mRNA
Length
1,855
Organism
Solanum lycopersicum
Description
Methylmalonate-semialdehyde dehydrogenase (AHRD V1 **** D3BUA7_POLPA); contains Interpro domain(s) IPR010061 Methylmalonate-semialdehyde dehydrogenase IPR015590 Aldehyde dehydrogenase
Location(s)
SL2.50ch01:94064519..94070389
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0055114
Length
5871
Nb exon
20
Sifter term
GO:0004491
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g106080.2.1 Methylmalonate-semialdehyde dehydrogenase (AHRD V1 **** D3BUA7_POLPA); contains Interpro domain(s) IPR010061 Methylmalonate-semialdehyde dehydrogenase IPR015590 Aldehyde dehydrogenase

TATGGAAGATGAAATAAAATTTAGGTCTTTTAATATTATCATGATACTCAAACATTTAATGTGGCTAATCTGCCAAAAAGCCAAATATTATTTATTTCCAAAAAATAGGACTCCATATCACTGATCTGATCTTCATAATCAATTAGATAATCTCTAAAACACTATCTTTCTTGAATATATATATAGATTTGGAATTTTGAATACACCATTTTTTTTTAACAAAATATTTGGAGAGAAACAATGATGCAGTTTTCAGTTCACAGAGTGAAGAAACTAAGGTCTTTGACTCCTGGTATTTTTGCTGTCGCTAATCATCACTTTTCAGTTGCTACGGAATCCTCATGGAAGCATCGAACTTCCCTCAGAGTTCCAAATTTAATTGGTGGCAGCTTTGTAGATTCACAATCATCAGAATTCGTTGATGTGATAAACCCAGCAACCCAAGAGGTGGTTTCTCAGATACCTTTAACAACGGATAAAGAATTCAAATCTGCGGTTTCTGCAGCCAAGGAGGCTTTTCCGTCATGGAAAAACACACCCATAACCACAAGACAACGGGTCATGCTCAAATTCCAAGAGCTTATTAGGAAGAACATGGATAAGCTTGCCTTCAATGTGACTACGGAGCAGGGAAAAACACTGAAAGATGCACAAGGGGATGTGTTCCGCGGTCTTGAGGTGGTGGAGCATGCGTGTGGAATGGCAACTTTGCAGATGGGTGAGTATGGGTCTAATGTATCAAATGGAATTGATACCTATAGCCTAAGGGAACCTCTGGGTGTTTGTGCCGGGATTTGTCCATTCAACTTCCCTGCAATGATTCCCTTGTGGATGTTTCCTGTTGCAGCTACTTGTGGCAACACCTTCATTCTTAAGCCTTCAGAGAAGGACCCAGGGGCTTCCATGATGTTGGCAGAGTTGGCAATGGAGGCTGGTTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATGTTGTTAATGCTATATGTGATGATGACGATATCAGAGCCGTATCATTTGTTGGCTCAAATCAAGCTGGTATGCATATATATTCTAGAGCATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGAGCCAAAAACCACGGGGTCGTCATGCCAGATGCAAACATAGATTCTACAGTAAATGCTTTAGTGGGGGCTGGTTTTGGTGCAGCAGGGCAAAGATGCATGGCATTGAGCACAGTGGTTTTTGTTGGTGACTCAAAACCTTGGGAAGAAAAACTGTTGGAACGTGCAAAAACTCTGAAGGTCAATGCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAAGAACGAGTATGTCGATTGGTTCAAAGTGGCGTTGATAGTGGAGCCAAATTATTGCTTGACGGAAGAGATATTGTGGTCCCAGGATATGAAAAAGGCAATTTTGTTGGTCCCACAATCCTGTGTGGTGTCACTCCCGATATGGAATGTTACAAGGAGGAGATCTTTGGCCCAGTTCTTCTTTGCATGCAGGCCAACAGCTTGGACGAGGCCATTAACATTGTTAACCAGAATATGTATGGTAATGGTGCTGCTATCTTTACCACATCTGGTGTAGCAGCGAGGAAGTTCCAAACAGAGATAGAGTCAGGCCAGATTGGAATCAATGTTCCTATTCCAGTGCCATTGCCATTCTTCTCGTTTACTGGATCCAAGGCTTCCTTCGTTGGAGACCTCAATTTCTATGGCAAGGCTGGAGTTCAGTTTTACACCCAAATCAAGACAGTTACACAGCAATGGAAGGACTTGTCAAGTGGTTCTGGCAACTCTCTAGCAATGCCAACTTCTCAGAAGTAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g106080.2.1SL2.50ch01:94064811..94070149538-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g106080.2SL2.50ch01:94064519..940703895,871-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g106080.2.1.1SL2.50ch01:94070125..94070389265-2
exonexon:Solyc01g106080.2.1.10SL2.50ch01:94067005..9406705551-n/a
exonexon:Solyc01g106080.2.1.11SL2.50ch01:94066736..94066887152-1
exonexon:Solyc01g106080.2.1.12SL2.50ch01:94066554..9406664491-n/a
exonexon:Solyc01g106080.2.1.13SL2.50ch01:94066370..9406645081-n/a
exonexon:Solyc01g106080.2.1.14SL2.50ch01:94065709..9406578678-n/a
exonexon:Solyc01g106080.2.1.15SL2.50ch01:94065589..9406562436-n/a
exonexon:Solyc01g106080.2.1.16SL2.50ch01:94065458..9406550144-1
exonexon:Solyc01g106080.2.1.17SL2.50ch01:94065278..9406535679-n/a
exonexon:Solyc01g106080.2.1.18SL2.50ch01:94065003..9406509391-2
exonexon:Solyc01g106080.2.1.19SL2.50ch01:94064816..94064921106-n/a
exonexon:Solyc01g106080.2.1.2SL2.50ch01:94069889..9406998698-n/a
exonexon:Solyc01g106080.2.1.20SL2.50ch01:94064519..940645235-n/a
exonexon:Solyc01g106080.2.1.3SL2.50ch01:94069607..9406967872-n/a
exonexon:Solyc01g106080.2.1.4SL2.50ch01:94069360..94069521162-n/a
exonexon:Solyc01g106080.2.1.5SL2.50ch01:94069196..9406927479-2
exonexon:Solyc01g106080.2.1.6SL2.50ch01:94068955..94069109155-n/a
exonexon:Solyc01g106080.2.1.7SL2.50ch01:94068518..9406858164-2
exonexon:Solyc01g106080.2.1.8SL2.50ch01:94068267..9406834680-n/a
exonexon:Solyc01g106080.2.1.9SL2.50ch01:94067881..9406794666-n/a
intronintron:Solyc01g106080.2.1.10SL2.50ch01:94067056..94067880n/a-n/a
intronintron:Solyc01g106080.2.1.11SL2.50ch01:94066888..94067004n/a-n/a
intronintron:Solyc01g106080.2.1.12SL2.50ch01:94066645..94066735n/a-n/a
intronintron:Solyc01g106080.2.1.13SL2.50ch01:94066451..94066553n/a-n/a
intronintron:Solyc01g106080.2.1.14SL2.50ch01:94065787..94066369n/a-n/a
intronintron:Solyc01g106080.2.1.15SL2.50ch01:94065625..94065708n/a-n/a
intronintron:Solyc01g106080.2.1.16SL2.50ch01:94065502..94065588n/a-n/a
intronintron:Solyc01g106080.2.1.17SL2.50ch01:94065357..94065457n/a-n/a
intronintron:Solyc01g106080.2.1.18SL2.50ch01:94065094..94065277n/a-n/a
intronintron:Solyc01g106080.2.1.19SL2.50ch01:94064922..94065002n/a-n/a
intronintron:Solyc01g106080.2.1.2SL2.50ch01:94069987..94070124n/a-n/a
intronintron:Solyc01g106080.2.1.20SL2.50ch01:94064524..94064815n/a-n/a
intronintron:Solyc01g106080.2.1.3SL2.50ch01:94069679..94069888n/a-n/a
intronintron:Solyc01g106080.2.1.4SL2.50ch01:94069522..94069606n/a-n/a
intronintron:Solyc01g106080.2.1.5SL2.50ch01:94069275..94069359n/a-n/a
intronintron:Solyc01g106080.2.1.6SL2.50ch01:94069110..94069195n/a-n/a
intronintron:Solyc01g106080.2.1.7SL2.50ch01:94068582..94068954n/a-n/a
intronintron:Solyc01g106080.2.1.8SL2.50ch01:94068347..94068517n/a-n/a
intronintron:Solyc01g106080.2.1.9SL2.50ch01:94067947..94068266n/a-n/a
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