Solanum lycopersicum mRNA Solyc01g090790.2.1

mRNA details  
Name
Solyc01g090790.2.1
Type
mRNA
Length
1,874
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch01:84467589..84472264
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4676
Nb exon
6
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g090790.2.1 BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

TATAGCCAACTGTCAAACACATTTATTTTTCTTATATCTACCCTTATTCCATCTATTATCTTCTCTCCAACACCAAAATTTTGAGAGAATAATAATAATAATAATAATAATAATATATTGTTGTTTTGATTCATTCATCACCAAGAAGAACACCTCCCTCTTATTTACCTTCGATATGAATCAGTGTGTACCGAGTTGGGACCTCGATGACTCTACCGTTCCTAGAAAAAATCTTATACAAACTCAATCCAATTCATTAGCCGTTGATGTCCCCTCATTAGATTATGAAGTAGCGGAGCTAACGTGGGAAAATGGGCAGTTAGCAATGCATGGGTTAGGGCCTCCACGGGCTAATAATAAGCCCATATCGAGCTACGGTGGCACCCTTGAATCTATAGTGAACCAAGCCACCCGTTGCAACGACGACGTTCCTCTTCATCTCCACGGGAAGTCCACCGTGGACAGGAACAAACAGAGTGGAGATGAGGTGGTTCCTTGGTTCAACAACCACAACGCGGTTGCTTACGCTCCTCCGGCAACCGGTTTAGTCGCAATGACTAAGGATGCGTTGGTGCCGTGTTCGAGGAACACCTCAAATTCGGACAACCAACGATCCGTGCACGTGCCAGGGATTGACGGCTCCACCCACGTGGGGTCGTGTAGTGGCGCCACAAACAGTAGAGACTGGACGGTGGCGCCACGCATGAGAGTACGGCCCACAAGACGTGAGTGGAGTAGCCGTGCGGATATGATTAGTGTAAGTGGAAGTGAAACGTGCGGAGGAGATAGCCGCCAATTAACGGTTGACACGTTTGATAGAGAATTTGGTACGACAATGTACACTTCTACGTCGATGGGGTCACCGGAAAACACCAGCTCCGACAAGCAGTGCACCAATAGGACGGGGGACGATCACGATTCCGTTTGCCACAGCAGAGATCAGAAGGAAGGAGGTGATGATGAGGATGACAATGACAACAAAAAAGGGTCTAAAAACTCCTCATCTTCTACAAAGAGGAAGAGGGCAGCCGCCATCCACAACCAGTCTGAACGAAAAAGAAGAGACAAGATTAATCAAAGGATGAAGACACTGCAGAAGTTGGTTCCAAATTCGAGTAAGACAGATAAAGCATCAATGCTAGACGAAGTGATAGAATATTTGAAGCAACTTCAAGCTCAAGTGCACATGATGAGTCGGATGAACATGTCACCAGCCATGATGTTACCATTGGCTATGCAACAACAATTACAAATGTCTATGATGGGTATGGGTATGGGTATGGGTATGGGCATGGGAGTTGCCGGAGTTTTTGATATCAACAACCTTAGCCGCCCCAATATCCCCGGACTTCCTTCCTTTCTCCACCCTTCTGCCGCCTTCATGCAGCCTATAACCTCCTGGGATAACTCAAACTCCGCGCCTTCTCCTCCCTCTGCTGCTATGCCTGATCCTTTAGCTGCCTTACTCGCTTGCCAATCACAGCCAATTAACATGGATGCGTATAGTAGGATGGCAGCATTGTACCTGCAATTCCAACAGCCCCCAACTGGCTCTGGCCCTAAAAATTGATAGTGTATATACCATATAGCAATAGTTACTCTCATGTTGTAAACATCTCCTAGTTTTCTTTACGTACGATTGAAATGACTAGGAGACCCTTTTACTTGTTTCGGATTGTCATTTTTGTTAAATACATAAGTTTGTTACAACTCTGTATTTCAAATTTCATCTCAGAAGTTGAATAGACTGTTACCTTTGTGAAGTGGACAAGTATATATGTAAATATTGAGATCTTTATGATCTATACTTCATTGCTAGTCAATAGTATAGTGAGTATAAACAATTATTGATATTTGATTACGTGAAACTTTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g090790.2.1SL2.50ch01:84467892..84472089465-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g090790.2SL2.50ch01:84467589..844722644,676-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g090790.2.1.1SL2.50ch01:84471989..84472264276-1
exonexon:Solyc01g090790.2.1.2SL2.50ch01:84471243..84471909667-n/a
exonexon:Solyc01g090790.2.1.3SL2.50ch01:84470443..84470553111-n/a
exonexon:Solyc01g090790.2.1.4SL2.50ch01:84470070..8447013566-n/a
exonexon:Solyc01g090790.2.1.5SL2.50ch01:84468070..84468432363-n/a
exonexon:Solyc01g090790.2.1.6SL2.50ch01:84467589..84467979391-n/a
intronintron:Solyc01g090790.2.1.2SL2.50ch01:84471910..84471988n/a-n/a
intronintron:Solyc01g090790.2.1.3SL2.50ch01:84470554..84471242n/a-n/a
intronintron:Solyc01g090790.2.1.4SL2.50ch01:84470136..84470442n/a-n/a
intronintron:Solyc01g090790.2.1.5SL2.50ch01:84468433..84470069n/a-n/a
intronintron:Solyc01g090790.2.1.6SL2.50ch01:84467980..84468069n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17689628%2Fdetails feature 17689628
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)