Solanum lycopersicum mRNA Solyc01g079400.2.1

mRNA details  
Name
Solyc01g079400.2.1
Type
mRNA
Length
1,964
Organism
Solanum lycopersicum
Description
Os06g0207500 protein (Fragment) (AHRD V1 ***- Q0DDQ9_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant
Location(s)
SL2.50ch01:78480169..78483143
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0031177
Length
2975
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g079400.2.1 Os06g0207500 protein (Fragment) (AHRD V1 ***- Q0DDQ9_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant

GACTTGTAGTGGAGTACTATAATAGAAGAGGAAAAAAGAAGCCCTGAGAAATAAAACAACAGTTTACTCAGAGAAAATCTGATGGAGAAACAGAGAAGTTTCTCCATTAAACCTACAAGGCTATGGCTTTTCTCTTTCACCATTTCATTTTCTCTAATCTTTTTCATCTTTTTCTCTATATGGGTTCTCAACCTTCCATTATATAGCCGTCAAGAAACTCATATTCAGTTCAACAGTAGTACTGCTACTGCTGCTTCTGCTTCTGCTTCAGTCTCTTTGAGACCCAGATCTCCTTTCAAGATTCAATCTTTAACTGGTTTTCACAAAAATTACTCAGCAACCCAAATCAAGAACTCAATTTTGGTGAGTACCCATTTCAATAGAGTTGAAAATGAGTCCCAAGTTTCTAACTTTTCAACATTTGAGGGAATCTTGGATAAGGAAAATCAGCCACAATCAGTGGCTTATGATATAAATAGTGAAAAAAATTCGACCTTTTCTGGTAACCGTTCGACTAAATCTGAAACTGTTTCTTCTAAGCGTCTTGAAATAGAAAGTACCAATAGTAGTATTCCTATTTGGAATCAGCAGCAGCAGCAACAGCAGAATGTGTCTATTGTTTTGTCTAAGAAAGAAGAAGCTTCTAGTAATTTGCTTAAGGTGGTGAATAAGAAAGAATGTGATATCACTAAAGGGAAATGGGTTTTTGATGAGAGCTATCCTTTGTACACAAATGCTTCATGTCCCTACATTGATGAAGGTTTTAGTTGTGAAACTAATGGAAGATTGGATAAGAATTATATGAAATGGAGGTGGCAACCTCAAGATTGTGACATTCCAAGGTTCAATGCTACTCAGATGTTGGAACTTATTAGAGGTAAAAGATTAGTGTTTGCTGGTGACTCCATCAACAGAAATCAATGGGAGTCGATGTTATGCTTGTTAATGGGAGCAATAAAAGATCCAAGAAAGGTTTATGAGACTCGTGGTCGGAGAATAACCAAAGAGAAGGGAAATTATTGTTTCAAATTTGTGGACTACCAATGTACAGTTGAGTACTATGTAACTCATTTTTTGGTTCATGAGGGCAAGGCAAGGATAGGCAGCAAACGGGCGCAGACCTTGCGTATTGATACGATGGACAAAGGTTCATCAAGATGGAGAGGGGCTGATATCTTGGTCTTTAACACTGCTCATTGGTGGAATCACCACAAGACTAAAGCAGGGAAGAATTACTACCAGGAGAGGAATCAAGTACATCCTCGTCTTGATGTTTCAACAGCTTTCGAAAAAGCCCTGACAACTTGGGCATCATGGATTGATAGACATATCAATCCAAGCAAAACACAAGTTTTCTTCAGGAGTTCTGCTCCTTCTCATTTCAGTGGGGGTCAGTGGAACACTGGTGGGCACTGCAGAGAAGCTTCTCAACCGATCCCTGAGACTTACAGAGGCGAATATCCAGAGAAGAACATAATAGTGGAGCAAATAATAAGCAAGATGAAGATTCCAGTTACTTTTTTGAACATAACTGGTTTGTCAGATTACAGGATTGATGGTCATCCTTCTATATATGGAAGAAAACCGGGTAGCTCTTCGCGTGTTCAAGATTGTAGCCATTGGTGTCTTCCAGGGGTTCCAGATACTTGGAACGAAATGTTATATATGCATTTAGAAAGTACTAGAAGAAAAAGTTTGCCCAACTGAAACTTCATCCTCAAATTGAAATTCTTTCATTTGTTCCGCATGTTTGATAAGCTGTATATAGCTGTGAAGTTGAGGTTTGTCAATTGTTCTCTTTTGGTGTGCCAATTATTATGTCTAGAGATGGCAAATGGACGGATTAAAATAGGTTCAAATTAATACAACAGCAAACGTTGCAAAATATGAACCTAAGTTCTTCCAAATTTTAAATTTGGCTTCACCTTTGTTCCCATTATCAAAAAAAAGATTCAAGGCAAAAC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g079400.2.1SL2.50ch01:78480425..78483062542-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g079400.2SL2.50ch01:78480169..784831432,975-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g079400.2.1.1SL2.50ch01:78482302..78483143842-1
exonexon:Solyc01g079400.2.1.2SL2.50ch01:78481931..78482123193-n/a
exonexon:Solyc01g079400.2.1.3SL2.50ch01:78481653..78481843191-1
exonexon:Solyc01g079400.2.1.4SL2.50ch01:78480835..78480993159-1
exonexon:Solyc01g079400.2.1.5SL2.50ch01:78480169..78480747579-n/a
intronintron:Solyc01g079400.2.1.2SL2.50ch01:78482124..78482301n/a-n/a
intronintron:Solyc01g079400.2.1.3SL2.50ch01:78481844..78481930n/a-n/a
intronintron:Solyc01g079400.2.1.4SL2.50ch01:78480994..78481652n/a-n/a
intronintron:Solyc01g079400.2.1.5SL2.50ch01:78480748..78480834n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17683119%2Fdetails feature 17683119
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