Sol Genomics Network

Unigene SGN-U575297

Unigene Basic Information

Unigene ID:	SGN-U575297
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2277 bp

>SGN-U575297 Tomato 200607 #2 (179 members)
GGGGGAATCAAATACATTGTGGGTTCAGACAAAAATGGCAAAGAGTGGCATTTTGGTAATTGTTTCAGCTCTTGTTGTTCTTGCAGTTTG
TGGTGTTTTTGCTGAGGAGAACGAATATGTGTTGACTTTGGACCATTCTAACCTCACTGAGACTGTTGCTAAGCACAACTTCATTGTTGT
TGAATTCTATGCACCTTGGTGTGGACACTGTAAGAGTCTTGCTCCTGAGTATGAAAAAGCTGCCTCAGAGCTGAGTAGTCATGACCCTCC
AATTGTTCTAGCTAAGTATGATGCAAATGATGAAGCCAATAGAGAACTTTCAAAACAGTACGAGATCCAGGGTTTCCCAACTATTAAGAT
ATTGAGAGATGGAGGAAAGAAAGTTCAAGACTATAACGGTCCTCGTGAAGCAGCTGGTATTGTATCCTACTTGAAGAAACAAGTGGGTCC
TGCATCTGCTGAAATCAAGTCGAAGGAAGATGCCACAAACCTTATTGATGAGAAAAGTATCTTTGTTGTTGGTATATTTCCAGACCCCTC
CGGAGAGAAATTCGAGAACTATTTAACGCTAGCTGAAAAACTGCGAGGCGAGTTCGATTTTGCTCACACTGTTGATGCTAAACACCTCCC
TCGGGGTGGACCAGTCAACAAGCCCACTCTTCGTCTTCTAAAGCCATTTGATGAACTCTTTGTTGATTTTGAGGACTTTGATGTCGATGC
AATGGAGAAGTTCATCTCAGAATCTAGTATTCCTGTTGTTACTATTTTTGACAATGACCCAAACAACCATCCTTATGTTAACAAGTTCTT
CGAAGGCACCAACGCCAAGGCATTGCTATTTGTGAACTTTAGCTCTGAATTTGATGCTTTTAAGTCCAAGTACAACGATGTTGCTGTGAT
TTACAAAGGGGATGGGGTGAGCTTTCTCTTGGGTGATGTTGAGGCTGGTCAAGGTGCTTTTGAGTACTTCGGACTGAAGCCGGAACAGGC
ACCTGTGATCATCATAATGGACGCTGATGAACAAAAGTATATTAAGGACCATGTGGAACCTGATGCCATTGCTGCTTACTTGAAGGATTA
CAAGGAAGGAAAACTGAAGCCACATGTGAAGTCAGAGCCCATCCCTGAAGTCAATGACGAACCTGTTAAGGTGGTTGTTAGGGATACCCT
CCAGGATATGGTTTACAAATCGGGAAAAAATGTGCTGTTAGAGTTCTATGCACCTTGGTGTGGCCACTGCAAGAGTCTGGCTCCAATTTT
GGATGAAGTGGCTGTATCATTTGAAAGCGATCCTGATGTTCTCATTGCAAAACTGGACGCAACCGCAAATGATCTCCCGAAAGGTGACTT
TGATGTTCAGGGATTCCCTACTATGTACTTCAGATCCGCCTCTGGTAACTTGTCACAGTACAATGGTGAGAGAACAAAAGAGGCTATCAT
CGAATTCATCGAGAAGAATCGTGGCAAGCCTGCTCAGTCAGACTCTGCCAAAGTCGATTCAGCAAAGGATGAACTTTAGAGGACTCTAGG
AACATTGTGTACTGGTGGATTCAAGTTTTGTTGGAAGCATTGTGTTTCTGGTGAATTCGACCTCCCACCGGACTACTGCTCTCTCCCAAC
GCTTCCGTTGTAGTTTTTGGAGCTTTTCAGCGCCAATAAAACGGTTGTATGTATCCATTTTGTGTATCGAATGTAGCTGGATTATGAGTT
TATATTATATCTATTGAGAAGTTCTCCAACTTTATAGTATCAGCAGTTGAAGTTATCTTCTTTGTCCCAGAATGCTACTGTTGGAATGTA
TGCCTCCTGTTGCAGTAAATAATGATACACAATAATTAAAGAAGTTCAAAAAAAAAAAAAGTGAAACAAGAAAAGCATAGGAGTTCAACT
GGTGCAAAACCAAGAACATGGCATCCCAAACTTCACAGCATATCTGAAGCTACAAGCTGAGATAAATAAATTTGATTCTACTATTTTGAT
TTGTGTTTTGAGATTGTGGAGTAATTGAAGGACAAAATCACCTCCACCAGGAAAACAAACAACAGATTGGGTAGTTTTTCCTCATCAAAT
TAGAGTTAATTAATGACATGTACAGCAAATATGAGGAAGTAAAACAAAAAAAAAAAGACAAAAAAACTCACATCATCCCTCAACTTTTGT
AATCATTTGGGAAGGCCTTCTTTAATTGAAAATCATTGTGGGCTTTGCAAGGATCGGAGCAACAAATTTTGTTTCAATTAAATAATTTGG
AGTCTAATGGACTTCCAACGTTAAATG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (32)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	6
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	10
Solanum lycopersicum	LeMiToLf01	leaf	30679	12
Solanum lycopersicum	LePU	Pericarp Turning stage of fruit ripening.	1542	1
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	5
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	18
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	23
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	5
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	6
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	17
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	14
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	15
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	4
Solanum lycopersicum	cTSB	seed	1880	3
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	cTSD	seed	1504	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1

mRNA member sequences (179)

Alignment image suppressed for unigene with 179 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (3)

Unigene	Build
SGN-U312832	Tomato 200607 #1
SGN-U312834	Tomato 200607 #1
SGN-U333955	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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