Sol Genomics Network

Unigene SGN-U567538

Unigene Basic Information

Unigene ID:	SGN-U567538
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1264 bp

>SGN-U567538 Tomato 200607 #2 (65 members)
GAACACAATTGGAAAGCTTTAAAGAAAGAAAAAAAAAACATGGCCTTGACTTTGAAGTCATTAATAACTCCTTTGCTTTTTGGTGCTTTC
TTTATCCTGATCTTACAGGTTGCTGCAGAGAAGCCAATAACTGAAGCAAAACTTGAATCTGCAATCCTTCAAGACTCGATCGTCAAACAA
GTCAATGAGAATGCCGAAGCTGGATGGAAAGCTGCATTCAACCCTCAATTATCGAATTTCACGGTTTCCCAATTTAAGCGCCTTCTTGGA
GTTAAGCCTGCAAGAGAAGGTGATTTGGAGGGAATTCCTGTTCTAACTCATCCAAAACTTAAGGAGTTACCAAAAGAGTTTGATGCACGA
AAGGCTTGGCCTCAATGCAGCACAATTGGAAGAATTCTAGATCAGGGACATTGCGGTTCTTGTTGGGCTTTTGGTGCTGTTGAGTCGCTG
TCTGATCGTTTCTGTATCCATTATAATTTGAGTATCTCTCTGTCTGTAAATGATCTGTTAGCGTGCTGTGGCTTTTTATGCGGGAGTGGT
TGTGATGGTGGATATCCTATAGCAGCATGGCGATACTTTAAACGTAGGGGAGTGGTCACAGAAGAGTGTGATCCTTACTTCGACACTACT
GGATGTTCCCACCCTGGTTGCGAACCACTATACCCCACTCCAAAATGTCATAGGAAGTGTGTCAAGGGGAATGTGTTATGGAGGAAATCA
AAGCATTACGGTGTAAATGCATACAGGGTCAGCCATGATCCCCAGAGTATCATGGCGGAAGTATACAAAAACGGACCAGTTGAGGTCTCT
TTTACTGTCTACGAGGATTTTGCTCACTACAAATCAGGAGTTTACAAGCATGTAACAGGGGGAAACATGGGAGGACACGCTGTTAAGCTT
ATCGGATGGGGAACTAGCGAGCAAGGAGAGGACTATTGGCTCATTGCTAATTCTTGGAATAGAGGCTGGGGTGAAGATGGATACTTCAAG
ATTAGAAGAGGAACAAATGAGTGTGGCATTGAACATAGTGTGGTTGCAGGATTGCCTTCAGCAAGAAATTTGAATGTGGAACTTGGTGAT
GCTGTCCTTGATGCCTCAATGTAAATTGATATCTCTTCAACAAGAACATTACATAATAATACTAGCAAATTAATATGATACTGGGGATGA
AAAAACCTTATGAATTTGCATATTTATCTTGTCGATTTAATCTGTATAATTCATAATTAATACTTGTTCTAATAGTAACTTTTCACTTTT
CAAG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc02g069100	Solyc02g069100

Genomic locations (0)

None

Library representation (21)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	7
Solanum lycopersicum	LePU	Pericarp Turning stage of fruit ripening.	1542	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	10
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	15
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	3
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (65)

Alignment image suppressed for unigene with 65 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312919	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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