EST details — SGN-E376785

Search information 
Request: 376785Match: SGN-E376785
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174830Clone name: TUS-19-M4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174830 is on microarray TOM1 spot ID 1-1-5.1.15.7 [Order] [Tomato Microarray Database]
See unigene SGN-U579408 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C23643 [cLED-5-P17] Trace: SGN-T49681 EST: SGN-E231065 Direction: 5' Facility: TIGR
Clone: SGN-C174830 [TUS-19-M4] Trace: SGN-T189398 EST: SGN-E376784 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E376785Length: 667 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376785 [] (trimmed) ACCAATCACTCCAACACCACCTATTGTCCATCCACCAGTCACTCCAAAACCACCATCACCAACACCTCCTATTGTTTCACCCCCCATTGTTTATC
CACCAATCACTCCAACACCACCTGTTGTGTCACCTCCAATCATTCCAACACCACCTATTGTCTCTCCACCTTTTGTCCCCAATCCTCCCGTGGTA
ATACCACCACCCTACGTGCCAAGTCCTCCGGTTGTTACTCCACCCATAGTTCCAACACCCCCTACACCATGCCCACCACCACCACCACCACCAGC
AATAATACCATCACCACCAGCACAACCAACTTGCCCCATTGATGCTCTCAAGCTAGGTGCTTGTGTGGACGTGTTAGGAGGACTAATCCACATTG
GAATCGGTGGAAGTGCTAAGCAAACATGTTGTCCACTTCTAGGAGGACTAGTAGACTTGGATGCAGCCATTTGTCTTTGCACAACTATTAGACTC
AAGCTCTTAAACATAAACATCATTCTTCCCATTGCTCTACAGGTTCTTATTGATGATTGTGGCAAGTATCCACCCAAAGACTTCAAGTGTCCTTC
AACCTAAATCAAGGATATTAAACAGGACATTTGACTGATACTGCCGCATTGTCATAGTTGAAGGCACAATAAATGTGTGAAAGTTCAATTTCCAT
TT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376785] SGN-U579408 Tomato 200607 Build 2 115 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189399 [Download][View] Facility Assigned ID: FA0AAD7BG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5