EST details — SGN-E368434

Search information 
Request: 368434Match: SGN-E368434
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176247Clone name: TUS-23-H5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176247 is on microarray TOM1 spot ID 1-1-4.4.11.17 [Order] [Tomato Microarray Database]
See unigene SGN-U579408 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C21673 [cLED-34-M24] Trace: SGN-T57383 EST: SGN-E243609 Direction: 5' Facility: TIGR
Clone: SGN-C176247 [TUS-23-H5] Trace: SGN-T181360 EST: SGN-E368433 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368434Length: 690 bp (942 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368434 [] (trimmed) CAGCCACCACCCTACGTGCCAAGTCCTCCGGTTGTTACTCCACCCATAGTTCCAACACCCCCTACACCATGCCCACCACCACCACCACCACCAGC
AATAATACCATCACCACCAGCACAACCAACTTGCCCCATTGATGCTCTCAAGCTAGGTGCTTGTGTGGACGTGTTAGGAGGACTAATCCACATTG
GAATCGGTGGAAGTGCTAAGCAAACATGTTGTCCACTTCTAGGAGGACTAGTAGACTTGGATGCAGCCATTTGTCTTTGCACAACTATTAGACTC
AAGCTCTTAAACATAAACATCATTCTTCCCATTGCTCTACAGGTTCTTATTGATGATTGTGGCAAGTATCCACCCAAAGACTTCAAGTGTCCTTC
AACCTAAATCAAGGATATTAAACAGGACATTTGACTGATACTGCCGCATTGTCATAGTTGAAGGCACAATAAATGTGTGAAAGTTCAATTTCCAT
TTTATCATGGCAATAAATTGAGAAAACAAAGGAGGGATATTAATTAAGCTTTAATTTGGCGTGTTTAATTAGCTTTTGATTAATGTACTGAATGT
TGTATTTACATTATTGTTTTAGGGAAATACTAATGGTATTTAGTATAGTGGAGTATGAATGCTGATTTGATTGTATGAACACGAATGAATGAGGA
AAAATCACCTAATTTATCACGTGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368434] SGN-U579408 Tomato 200607 Build 2 115 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181361 [Download][View] Facility Assigned ID: FA0AAD11CD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0060 Quality Trim Threshold: 12.5