EST details — SGN-E264952
| Search information |
| Request: 264952 | Match: SGN-E264952 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C46013 | Clone name: cLEI-10-J9 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C183132 is on microarray TOM1: SGN-S1-1-7.3.3.5
See unigene SGN-U579408 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C183132 [TUS-41-G2] | Trace: SGN-T196500 | EST: SGN-E395174 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183132 [TUS-41-G2] | Trace: SGN-T199460 | EST: SGN-E398134 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E264952 | Length: 637 bp (918 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E264952 [] (trimmed)
CATATGTGAAACCACCTACTACCCCTAAACACCCTCCACATGTTAAACCACCTTCCACCCCTAAACACCCTAAACACCCCCCACAAAAACCATGC
CCTCCTCCATCTCATCATGGTCCTAAGCCACCAATTGTAAAACCTCCACATGTACCAAGACCTCCTATAGTGCATCCTCCTCCCATTGTCTCTCC
ACCTTCCACACCTAAACCACCAAAAACACCACCATTCACTCCAAAACCACCATCACCAATACCACCTATTGTTTCACCCCCTATTGTTTATCCAC
CAATCACTCCAACACCACCTATTGTCCATCCACCAGTCACTCCAAAACCACCATCACCAACACCTCCTATTGTTTCACCCCCCATTGTTTATCCA
CCAATCACTCCAACACCACCTGTTGTGTCACCTCCAATCATTCCAACACCACCTATTGTCTCTCCACCTTTTGTCCCCAATCCTCCCGTGGTAAT
ACCACCACCCTACGTGCCAAGTCCTCCGGTTGTTACTCCACCCATAGTTCCAACACCCCCTACACCATGCCCACCACCACCACCACCACCAGCAA
TAATACCATCACCACCAGCACAACCAACTTGCCCCATTGATGCTCTCAAGCTAGGTGCTTGTGTGGA
CCTCCTCCATCTCATCATGGTCCTAAGCCACCAATTGTAAAACCTCCACATGTACCAAGACCTCCTATAGTGCATCCTCCTCCCATTGTCTCTCC
ACCTTCCACACCTAAACCACCAAAAACACCACCATTCACTCCAAAACCACCATCACCAATACCACCTATTGTTTCACCCCCTATTGTTTATCCAC
CAATCACTCCAACACCACCTATTGTCCATCCACCAGTCACTCCAAAACCACCATCACCAACACCTCCTATTGTTTCACCCCCCATTGTTTATCCA
CCAATCACTCCAACACCACCTGTTGTGTCACCTCCAATCATTCCAACACCACCTATTGTCTCTCCACCTTTTGTCCCCAATCCTCCCGTGGTAAT
ACCACCACCCTACGTGCCAAGTCCTCCGGTTGTTACTCCACCCATAGTTCCAACACCCCCTACACCATGCCCACCACCACCACCACCACCAGCAA
TAATACCATCACCACCAGCACAACCAACTTGCCCCATTGATGCTCTCAAGCTAGGTGCTTGTGTGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E264952] | SGN-U579408 | Tomato 200607 | Build 2 | 115 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T81791 [Download][View] | Facility Assigned ID: TGSBM53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.860 | Expected Error Rate: 0.0035 | Quality Trim Threshold: 14.5 |
Working
