Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0108F03_T7_95861

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0108F03_T7_95861
Primer
T7
ID from Seq. Facility
LE_HBa_108_F03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
730 trimmed for vector and quality, 790 raw
Genbank Accession
DU057060
Sequence
>LE_HBa0108F03_T7_95861 (raw untrimmed)
CCTGGGTACCGCGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGCGCTTACCAAGATGCATCATTCCACTTTTCACTTGATAATTTTTTCTAC
ACCAACATGCTATTCTAGTCGTAGAACTTATATCTTAATAATCTTTTTACGATATTATAGGCTATTGTATCAAATATACTGTCAACTATATACAGTTTGT
GTTGATTCACTTTAACACATAACATATTGAGATTTCACCACTTTATTATTTTTTAGTATCTATCCCTCTCATGAGGTTTCATAAAGTGTTATGTCATAAA
GAGAACAGTGTCTCCTTATTATGATCATTTTGATTCTTTGATCCTCCCCCTTTTTCAAGGATTATTTTACACAAATTCGATTAGTTTATCATGCTTCATG
CATCTCGCAGACTCTAATCTCCCCTTATGTTAGACAAAGTAACATACATCTCAATCTTTTAGAGAATCTATCTTTATGCATCATCATATATTCATTAATT
ATATACTACATATCAAAATAATGGACGAAAAATATTTGGTCCTTGAGCATAAATCAGTTGAAACAAAATCTAATCATTATTTATTGGTCTCATGTGTATA
ATTACTTTTGTATGCAGTATCATATTTCAGATTAATGCATGAAGCTTTATTTTCACAGGCAATGGTTTCACTATATCAGACATTTAGTGTCGCAACATCT
TTTACATTTATCAATAATATCAAGATTAATTATATTGATTTTATATTTTGAAAGTTGTTCTCTTAACTCAATTATCTTGCACAAACAATA
>LE_HBa0108F03_T7_95861 (trimmed for quality and cloning vector)
AGCTTTGCGCTTACCAAGATGCATCATTCCACTTTTCACTTGATAATTTTTTCTACACCAACATGCTATTCTAGTCGTAGAACTTATATCTTAATAATCT
TTTTACGATATTATAGGCTATTGTATCAAATATACTGTCAACTATATACAGTTTGTGTTGATTCACTTTAACACATAACATATTGAGATTTCACCACTTT
ATTATTTTTTAGTATCTATCCCTCTCATGAGGTTTCATAAAGTGTTATGTCATAAAGAGAACAGTGTCTCCTTATTATGATCATTTTGATTCTTTGATCC
TCCCCCTTTTTCAAGGATTATTTTACACAAATTCGATTAGTTTATCATGCTTCATGCATCTCGCAGACTCTAATCTCCCCTTATGTTAGACAAAGTAACA
TACATCTCAATCTTTTAGAGAATCTATCTTTATGCATCATCATATATTCATTAATTATATACTACATATCAAAATAATGGACGAAAAATATTTGGTCCTT
GAGCATAAATCAGTTGAAACAAAATCTAATCATTATTTATTGGTCTCATGTGTATAATTACTTTTGTATGCAGTATCATATTTCAGATTAATGCATGAAG
CTTTATTTTCACAGGCAATGGTTTCACTATATCAGACATTTAGTGTCGCAACATCTTTTACATTTATCAATAATATCAAGATTAATTATATTGATTTTAT
ATTTTGAAAGTTGTTCTCTTAACTCAATTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.909679
Expected error %
0.26568
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0108F03
Clone
Clone name
hba-108f3
LE_HBa0108F03
C07HBa0108F03
P108F03
Clone type
BAC
Contamination
none
Estimated length
136,673
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found