Clone hba-108f3

Clone
Clone name hba-108f3 LE_HBa0108F03 C07HBa0108F03 P108F03
Clone type BAC
Contamination none
Estimated length 136,673

Library
Name Tomato HindIII BAC Library	Cloning host E. coli
Organism Solanum lycopersicum (formerly Lycopersicon esculentum)	Cloning vector pBeloBAC11
Accession Heinz 1706	Restriction enzyme HindIII

Ordering Information
BAC Clones BAC clones can be ordered from the clone ordering page at TFGD

Physical mapping

Fingerprint Contig Builds (FPC)

Tomato FPC (AGI 2005): ctg323 : [coherent], 20 members:
LE_HBa0001A24, LE_HBa0037K05, C07HBa0048D18, LE_HBa0049M11, LE_HBa0054J09, LE_HBa0069K12, C07HBa0108F03, LE_HBa0112M13, LE_HBa0119P02, LE_HBa0120B09, LE_HBa0149C03, LE_HBa0153J18, LE_HBa0158J17, LE_HBa0166N17, LE_HBa0196H16, LE_HBa0197C14, LE_HBa0251O12, LE_HBa0290B10, LE_HBa0302E19, C07HBa0308O12

Marker matches - overgo what's this?

Plausible matches

Probe	Map	Plate	Well
C2_At4g29490	Tomato-EXPEN 2000	plate 13	E7

Additional Info

Overgo Plating Progress Report

Conflicted matches

None

Marker matches - BLAST

None

Marker matches - manual

None

Physical map (from marker matches)

View on physical map chromosome 7

FISH map

Not on FISH map

FISH images

None

IL Mapping

None

Sequencing

This clone is being sequenced by the Chromosome 7 Sequencing Project. (View projects)
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Sequencing Project

Chromosome 7

HTGS phase

2 - fragmented, ordered

Sequencing Status

in_progress

Sequencing Organization

Uploaded by account 'france'

Full Sequence

141,208 bp
C07HBa0108F03.2
AC212629.2 (GenBank)

[View]

End Sequences

LE_HBa0108F03_SP6_95860 (Good)
LE_HBa0108F03_T7_95861 (Good)

Warnings

sequence is not finished to HTGS3

FTP

Chromosome 7 Sequencing repository (FTP)

Chromosome Assembly

this clone is not part of a chromosome assembly

Restriction Fragments

HindIII in vitro (27)

1017, 1224, 1503, 1503, 1542, 1790, 1894, 2103, 2233, 2461, 2616, 2974, 3048, 3048, 3369, 3749, 3976, 4964, 5493, 5716, 5786, 6463, 7752, 8496, 10261, 11236, 30456

HindIII in silico (30)

1008, 1176, 1214, 1490, 1500, 1502, 1515, 1555, 1770, 1870, 2073, 2222, 2451, 2616, 2972, 3021, 3046, 3389, 3787, 3985, 4755, 5149, 5369, 5485, 6140, 6393, 7707, 8422, 10904, 30238

Fragment Lengths Match Score

0.94

Annotations

Browse

LE_HBa0108F03 has no browsable sequence annotations

Download

temporarily unavailable

User comments

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End Sequences

e.g. crystallin

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Map	Map position and cM
Chromosome / Linkage Group

IL Bin Mapping

Assigned to project	Mapped to chr
Mapped to bin

Verification

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Clone hba-108f3

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