Clone Read LE_HBa0046L21_T7_94649

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0046L21_T7_94649
Primer
T7
ID from Seq. Facility
LE_HBa_046_L21-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
333 trimmed for vector and quality, 823 raw
Genbank Accession
DU056212
Sequence
>LE_HBa0046L21_T7_94649 (raw untrimmed)
AACCCCATTGATAACTCCTAATGTGAGTGTTTCACAGATGCACTCGGTACACTCGAATTCGGGATACTCCGACGTTTTTCACAGTCCTAATTGAAATGTG
TGGACAACTTGTGCTTTCCATGTTGTTGGAACACTGCTGAAAGTGAAGGGTAATTCAAATTCCCCACATGCCCTGCTCTTTTTGCCTTGCTACAATCTGA
ATACTTCCTTGTAACCACTTGAATATTCTTGGTTGTGTAATTGGAATTGCAGAGGAAATCGACGTACTCATAGGAAGTTAGGTCGTAAATCAAACCAGGG
TCCATTGCCTTCTGAGGGTGCACATGTCCTGCCCCAAAATCTATCACAGACGACGAATTTCCAGTTGATTCATCCATCATAATTTGTCTCCTATTATCCA
CTGTATAGGCAGTTGTCATCAATGCTGATCTTATAGCTGCTGGGCTCCATCCCGGATGGGCTGCTTACACAATGCTCCTAGTCCAGAAACATGTGGGCAA
GCCATGGAGGTTCCTGATACAATGTAGAACTCCGTTCTACGCGTATCCATGGAATCTCGCTTGGTTCAACACCATCCGTCTAGCTGCAAGGATGTTCCTC
CATGTGCAATCACATCATGCTTCAAACTTCATTCACTCTGCGTTGGGGCTTCGGTCGAAATAATTCACTACTGGACTGTTCCACATTACAAATTACTCTG
AATAAATGTTTCGTTGTTGTGATTGACTTGAATTACCTATTGACTTCTATCCACTACTATACATCTCACTGTGTCCCTTACCTGGGATCACTGTAATCTT
CCATCCTTCTCTGTTATACCTCC
>LE_HBa0046L21_T7_94649 (trimmed for quality and cloning vector)
GGACAACTTGTGCTTTCCATGTTGTTGGAACACTGCTGAAAGTGAAGGGTAATTCAAATTCCCCACATGCCCTGCTCTTTTTGCCTTGCTACAATCTGAA
TACTTCCTTGTAACCACTTGAATATTCTTGGTTGTGTAATTGGAATTGCAGAGGAAATCGACGTACTCATAGGAAGTTAGGTCGTAAATCAAACCAGGGT
CCATTGCCTTCTGAGGGTGCACATGTCCTGCCCCAAAATCTATCACAGACGACGAATTTCCAGTTGATTCATCCATCATAATTTGTCTCCTATTATCCAC
TGTATAGGCAGTTGTCATCAATGCTGATCTTAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.963279
Expected error %
1.65676
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At3g14240.1 Score 176 E Value 3e-45 Identity 23.70% Align. Length 332bp (99.70%) Frame 2
68416.m01803 subtilase family protein contains similarity to SBT1 GI:1771160 from [Lycopersicon esculentum]
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At4g34980.1 Score 105 E Value 3e-24 Identity 16.30% Align. Length 305bp (91.59%) Frame 2
68417.m04959 subtilase family protein similar to SBT1, a subtilase from tomato plants GI:1771160 from [Lycopersicon esculentum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAL32016.1| Score 176 E Value 2e-43 Identity 23.70% Align. Length 332bp (99.70%) Frame 2
AT3g14240/MLN21_2 [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAK25839.1| Score 176 E Value 2e-43 Identity 23.70% Align. Length 332bp (99.70%) Frame 2
putative subtilisin serine protease [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0046L21
Clone
Clone name
hba-46l21
LE_HBa0046L21
P046L21
Clone type
BAC
Contamination
none
Estimated length
113,005
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found