Clone Read LE_HBa0047L21_T7_9401

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047L21_T7_9401
Primer
T7
ID from Seq. Facility
LE_HBa_047_L21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 875 raw
Sequence
>LE_HBa0047L21_T7_9401 (raw untrimmed)
GCTCCCTCGGGCCCCGCGGGATCTCCTACGAGACGACCTCGCGGGCTCGCAAGCTTCCAAATTTTAGAAAGATATTGTTTACCCCTCTACCTCTCCTGGT
ATCG
ACTCTATTATTAGGGTAACGAGCCCTTTTGAGGCTCTCTGGATGCATTCACGAGTGGCTTTTTAGGCGTGTCCTCTATCGCGATGCGGTAAATGAC
TACTCTATTGATTCTGATTACTCAAGGTACATTACATAAACTATCACGCTCATGATCATGCCTTAGTCTTGCGAAGTGACTGTTATATACATTCGTAATA
ATAATTCCATCGTAGTCATGAGCACATGAATACTTACTCTAATAGTATTCAATATGACATTGTATCCTGGGAACGTCAACAGTCACCATAATGTATGTAG
GGACTGTAGTCGCACCACCCTACTGGTCTCAAGGGATCCGATGTCGAGAACGTCCACGCTTATTCTTTGAATCGGACTGCCTCGAGGCAACACGTTCACA
CTACTGCATCCTGAGTCACAAGGCGACTCCTAGAACTTCAAGGATCCGATGTCAACACCCAGCGCCAACAATCTATCAAAACGGAGTCACGAACCCACAC
ATTCCCTTTTGAGATCCCGTGCCACCAACCAATCATAGAGAAACCCGATCTAATTCTCACGACCGACACACTACGAACAATGGGATAAAATACCGACTTA
TCGCACCGCCCAACATACATAATAAGAGATCTGCTTACATTCAGATACTGCAACAACAACCGATTCCAACGAAACGAATTGAGCTCTATCTCATTCGAAC
TGAACGCACTCCCAGAGAACATTTTTGTCCCCTTCTCACCCCACTGACCTAATGCACTCACGCAGAAAGCCTAAA
>LE_HBa0047L21_T7_9401 (trimmed for quality and cloning vector)
ACTCTA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.373179
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047L21
Clone
Clone name
hba-47l21
LE_HBa0047L21
P047L21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found