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Clone Read LE_HBa0029C01_T7_91873

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0029C01_T7_91873
Primer
T7
ID from Seq. Facility
LE_HBa_029_C01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1467 raw
Sequence
>LE_HBa0029C01_T7_91873 (raw untrimmed)
TCTAGCTATAAGCACTCTCTTAGACAGAAACTCAGTCCGGAGCCATGGGAGAATCCTTCTGTGAAGTCAGACAGTGAGACAGGATAGTGCACACGCATAG
TTGGTTGCCGCTCAAGTAACTGCACACTTCGCTACGTTTAACTTGTCAGCGGTTGCAACTATATAAAACGTGTGTCGTGTCGCTGTGTAGTTACTGGCAA
TTTTCTCTCAATCATAGACGTTGCTTCCTTCTATCCGCGTGGATGCATGACCTACCAATGCGTCTCTAAACGTTGCNTACTGATGTTGCATAGTGTCTAC
TGGACCTGACGAGCTGTCAGTNTTGTCGTGAGTAGCAGAAGNAGTTGTAACTGCTGGAGGATACTGAAGCATACTTCTATGCATTCACTCTAACTCTCTA
GAACGTCCATATCTCTAACATCGCNCGTGTGCTATGTATTCTGGTNGCTATCGTGTCCTTCTATATCGTAGCAACTAGCCTAGCGCTTTAANTGGAGAAT
ACGTGCGTATTGATGGNAAATCGTCGATAACAGAACTCGAACATGTTCGCTAGCTAACTGCGCTCATAGTATNGATGGGCATAGATTGCTGTGCCAATAC
ATCGTGCGCAAGGAAGGAATATTAAGAATGACGATAAGCAATAGTACGTGGCTGGTTCTGATTAGTAGTCTACGAGATAATATGTGTGCTTTGTTGTTCG
TACTGGAGCGTCTGTCATATACATCTGCACACTCTCCTGGTCTCTACGTAAGGTTGTGTGGTTGACTATGCGTGTCTNAGTTCTGTCGNATGACTCTTAG
TTATGCTGATGCCTGTTTGCTGTATACTGTCTTTNTAGGACGTGTCTATCGATACATACACTGTCTGCGAAGTTGGTGAGGTTACATATCGTTACTCCTC
CAGACGATCCACAGTGATCATCGACAGGTCATCACCTGCGAACGTACTACAATCTGTGACTAGAATCCCGCGAGATTTAAGAGAAATGATACTACNACCT
CCGACGTGACATCTTTTACTCGACGNCTCTGCGATACTCATNCGACGATCACGGCGCCGCAGCACAGATGCTCACCGCTATCGCGTCGCGACCGACCGGA
CACCACGAACGCGAGACAGCCTACCTGAGTACTTAAACCACACCAAATGAGCGCACAAATCTTGACCGCGATCCGTGACTGAACGTGACGACATGATCAC
TCATGAGGACTGAAGGCTGATGAGTNCGAACGCGACCTCTGTGAGTTGGAATCACNGCGTCTCGATCAGATGATTGCTCGTGCAGCGCGCCATTTGTAAA
TTAGTGCTTATCGGCATTTTGCGGGGACGCGAGTTGTTTCACGCGAAAATGTGTGATGTACTTCATCGTCATAGTGCTCGGTCGTAGTCGTACTCCGGCT
GATCAATACGTGTTGCTACTACTCCCCTGGCTGACACGACAGCTTCGAATCTCGCACTCACACACGC
>LE_HBa0029C01_T7_91873 (trimmed for quality and cloning vector)
TTG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.64275
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0029C01
Clone
Clone name
hba-29c1
LE_HBa0029C01
C11HBa0029C01
P029C01
Clone type
BAC
Contamination
none
Estimated length
113,305
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found