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Clone Read LE_HBa0029C01_SP6_91872

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0029C01_SP6_91872
Primer
SP6
ID from Seq. Facility
LE_HBa_029_C01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
569 trimmed for vector and quality, 931 raw
Genbank Accession
DU054386
Sequence
>LE_HBa0029C01_SP6_91872 (raw untrimmed)
TCCGGCTATACCCTCAGAAATAATTTCGTACAATATAATTTAATCATATCAAAATAAATTACAGATTGTACCTCCTTTAAGGGATAATTACACTCCTTGA
TGTAATTTCAAATTCTTTTAAAGTACTTATTTAACTACCCATGTCAGAATTACTAACACCAATCTAATTTCAAAACCCACTGAGACTTGTCATTGAATCT
CTACCTAAGAGGCTCAAAGGTTCTTGAAACAAAGGCATGGAGCTTGAGAATGTGCTAAAGTTTGAAGTACAACGATCAGGTTGAAGATTACTCAAATTAA
GAGATTTTACATTAAAAAAAATAGTCGGTTGTACATCCATAGGCTCTTTCTCCCTACTTTGAGTAGTCTTTCACATGGATCCTTGTACTTTCACTTTAAC
ATATTCTCTTTTTTCATGCCTTTGTTCCAAGAATATCCAAAGCCTCCAACGTTAATGACAAGTCTACAAAATCTTTACCTCGACTTCATCGATTGCGTTT
TGATAAAACACGACTTGCATAATCTTATATGATATTGTTGCTTCGAGATCACTTTGATGTTATTTTTATTTCTTAGCTAGCACTTTATAATATTTATTGA
TTGAGAGAATCTTGATGATAACTTATTGCTTTGACAACGTATTTGGTGATATTATTGCTTTAAGAGCATGTTTTATCCTATTGGGGGACTTTAACCTACT
ATTTTTCATATTTTACTTTGACATTCCTAAGTTAAGGGTTTTGAGTGATTCTTTATCACTTTTTAAAATAGATTAAAAATCTTTCTAGAGAACATTACGT
TTTTCATTGATAAAAACTTTTTTTCTGATACTAACTACCTAATCCCCACCGCTGGCCTTTCCAACAACTTCAAAAATTAACCAAAACTCCCCTTATATCT
TGTCTTCGGAAATCTCGAATTTGTTTCTATT
>LE_HBa0029C01_SP6_91872 (trimmed for quality and cloning vector)
ATAATTTAATCATATCAAAATAAATTACAGATTGTACCTCCTTTAAGGGATAATTACACTCCTTGATGTAATTTCAAATTCTTTTAAAGTACTTATTTAA
CTACCCATGTCAGAATTACTAACACCAATCTAATTTCAAAACCCACTGAGACTTGTCATTGAATCTCTACCTAAGAGGCTCAAAGGTTCTTGAAACAAAG
GCATGGAGCTTGAGAATGTGCTAAAGTTTGAAGTACAACGATCAGGTTGAAGATTACTCAAATTAAGAGATTTTACATTAAAAAAAATAGTCGGTTGTAC
ATCCATAGGCTCTTTCTCCCTACTTTGAGTAGTCTTTCACATGGATCCTTGTACTTTCACTTTAACATATTCTCTTTTTTCATGCCTTTGTTCCAAGAAT
ATCCAAAGCCTCCAACGTTAATGACAAGTCTACAAAATCTTTACCTCGACTTCATCGATTGCGTTTTGATAAAACACGACTTGCATAATCTTATATGATA
TTGTTGCTTCGAGATCACTTTGATGTTATTTTTATTTCTTAGCTAGCACTTTATAATATTTATTGATTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.937333
Expected error %
1.36285
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0029C01
Clone
Clone name
hba-29c1
LE_HBa0029C01
C11HBa0029C01
P029C01
Clone type
BAC
Contamination
none
Estimated length
113,305
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found