Clone Read LE_HBa0120P13_T7_87913

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120P13_T7_87913
Primer
T7
ID from Seq. Facility
LE_HBa_120_P13-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1843 raw
Sequence
>LE_HBa0120P13_T7_87913 (raw untrimmed)
TATAGCGCGTCGCGCTNTCGTGCGCGCGCGATGCCGTGGCGCTGCGCGTCTGCCGCGTCCTNTAGTAGAGTCTATCTAGACCCGTCTCCGTCTGTATGTC
GTCTGTGAGTGTCGTGCCATCGTGTCTCGAGAGAGNGTGTGAGATATATAGCGACTCACNANACTGCACTCACCCGCTGGGACAGCGACTCGTACTGACT
CGGCTCTCGCNTCGGTGAGCTTCGCTTTGCTGTGGCATACGATTATNTCTAGTGGTGAGCGCCTTCTCTACTNANCGTCGCATACCTACACTATAGGCAA
CCTNCATGNGTGTACGGCNGTGCGTAGCGCTGCATACTACATCGCCGACTAACGACCAGACTCCGCATATCATCGCAACACCGCTGTCNCGACTGCTATG
CTNACTACCTCCACTCANCTCCTCCGCCCAACGCAACTGATAANACCCCTCCGGGATATACGCTATATATAACGGTATTGAATATATACATGACCTCTTG
TCTCACGCTATCGCTTCATCCTGTATGATACGCGCCTTACTACACTAGTATATACTCTCGGTGTCATACTACTTGGTATAGCTGAGCNGTACATACGACT
CATCACACNCTTCATCTCTGATATGTGCATCTACTGCGCTGATACTCTGTCCTCTGCTATCTATACGCATATGCTCGTTACNTATTACATACACTCGTGT
GTATAATGCCTTTNACGCATTTTCATCGAACTATTACTGTGGCGTACTAGCATCCACTCGTGATGCATGTACTGCCACTTCTATTATATTATCTCTGCGT
CTACTGTGATCGTCCTTTGGTTTATTANTTATGTGTCGACTTTTGTACAATTANCTGTATCAGTGACTTCTTCCTATATGTATCTTACCACATGTGATGA
TCTAGGTATACTATATAGAGTAAATGCATGTGTTNGCTATCTCANCTANATCTACCAATGTAATGTAAGACGTGCTCGTGAGATACACTTGGACAANTAT
CTCGTATAATGTAAACATAGCTACGTAACATTAGCGTCCACAGCTGTGACCGCACTATGTGCCTCNCTATTGTNGCGATGTCTACAGACCTACNCTACTA
TACTGCTGCGTCGAGCGATGCGTCACTGCTCTTATACAACTATTCTCCTAATATCGATAGATTAAGCGTAATGATCCGACTTAAATNTAGCTCAGNATCT
ATACGTATATNTCATACATATTGACCNATATGTACTATGACCACTCTTAATTTTCGATCGTCTACATATGTCNCATCACCACACAATCTCGGNACCANCA
TATGTAGCTNCTAATACTACCACTNCTATATATGTACCTTGACACATAATANCTCACTATACCGCTCATGGATGTGTTCTGCGCATGTATTCGACTACTA
CANCATCTTCATGACTACTCTCGTTAGTGCNCCGTGCGACGCCGNGCACCTACAACTCGATACTACGCNTCTGTCGTCNATACGCGCATTCNCATCGATA
TGATATACTTCATTATACGACTATATATATACACGATGCTTGATCTNTGATANTACTAANGTANGTTCGANGTNTACATGTCNACTTTATATACAGANCG
ACTGCTCTATGCACCACTATATAGCGATCTACTACTGTNCNACTGTATANGTATNGTNTNAGCGACTCTACCGCTGTCTTTATCTTTNCTACNATCTATT
TATGACCTATTGCGCTCGTCACTTTATACTNTGCTNCTATTACATACATTTCTATANTNCACATNCNCTGCTACTACGTACTANATACTTTNTCTATNTA
CTTTTGTATACNTACTGCTTTATTTATACTGTGTATATTATCT
>LE_HBa0120P13_T7_87913 (trimmed for quality and cloning vector)
TGCG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.62893
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120P13
Clone
Clone name
hba-120p13
LE_HBa0120P13
P120P13
Clone type
BAC
Contamination
none
Estimated length
136,259
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found