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Clone Read LE_HBa0093N02_T7_86259

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0093N02_T7_86259
Primer
T7
ID from Seq. Facility
LE_HBa_093_N02-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1500 raw
Sequence
>LE_HBa0093N02_T7_86259 (raw untrimmed)
ACTTCTGCACATCGCTGNGTTAGCTATCNCGATAGTGTGATAGTACNTCTCTGACNGCCTAGCANAACANTGTGTACTAGGCTNCTGTACTCTTCGTTGT
TATGTGTAGCTGTGTCGTCTCTGNGAGTGTGTGCATATCTCTCGCTATNTGGACGTTGGTATATCATNANCATCTTGATTTGANNAGAGAGTCGATTAGT
AGTGCGTCGCTCGTGGCTATATGTTGCATCGAGTGTNGNCTGTGAGCTGCTGCATGCATACTGTATGCAATGATCATTTCACTATTTGGATATGTGATAC
ACTGTACGCGGTGATGCGACACGNTGATGNGNACATGATTGACGACACAGATAGTCACAGATNANTGAGCGCACTCTGCCGNNCATNATATNAGATACAC
GCTCAGCAATGCGATAACATAGGATAGCGAGCNGNGAGCGCATGCGATAGNGNGCGCGTGTGCAACACACTNGCCNTGCCAGTGCTGACNCACACTAACG
TNCTNTCAGACGAGNGATGCAGACGTCACACGCTGGCNCNGAACGNCATNGTCNAGACACCAGCACACNGCTNGACNCAGCTTGTGNACGCGACANCAGC
ATGTCAGATATGCTATGACNGTTCCACTCATGTCATACCCNCANCNTTGTATATNCGAGTCTCTGTCGACCACACTGTGCTATTGCGTAGTGCTCGACTT
GCACTNCGCGCGACCCTCTACGNACTNCGACTNGNTNGAGTGATGNGACAGNGTAGTGTATGAGCACGATGGAGTGCTGCATNCNGTTGTAGATAGTGCG
TGACAGACGCGCTNTGATGCGAGAANACTGCGNCGTTGATAGTGGCNACAACGTCGTACTGACTCATGACTCGAAGTGNGTGAGATGACATANGTGAGAC
TCACGTNCTNCATGACCACNGCAGATCNTCACACTGATTTCTCACATTGCGAGCGTGCNTACGTGCAACATGCTNCACTAATACNGCTTACGTGATGATG
TCTTCTCTTGCTCTATGCTCTGCTATCGCANGTATGTGATGTCGTCTGCATATCGTGTCTATGAGACTTGCTATGTGCNCCCGTTAGCGCCTTCGCTGCT
GCGCGTGCATGCGCTACCCATGCCTGNGTGCACTAGCTCGCTCTGATGCTCTTNCGGACGTACATCGTGTAGTCACATCNGTCTCGATGTCCGTGCCTGC
GCCTATGCTCTCTGATGTGTTGCTTCACTGCTATATACTCGTATACGGCTGACTAGCGTGCTCTACTNGCTATATATGCTACNACGNAGCAGCGCACGTG
TTAGCGCGTGCTGCTGTGCGTGTTGTGTGNGCTCAGGGNCTNACNACACATGTCGTTCACTAGTAGGNGTGTGCTNGNGCGTTGTGATGCATGTTNTNGN
TGTGNGNGTGCTCGTTGTGATACTATCACTCTGNTGTNAGTGACTGCGCGTGCGACACTGTNGTAGTCTGATTCTCTACTCACGCGATTGGTGCGGCTCN
>LE_HBa0093N02_T7_86259 (trimmed for quality and cloning vector)
GCG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.40296
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0093N02
Clone
Clone name
hba-93n2
LE_HBa0093N02
P093N02
Clone type
BAC
Contamination
none
Estimated length
95,115
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found