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Clone Read LE_HBa0093N02_SP6_86258

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0093N02_SP6_86258
Primer
SP6
ID from Seq. Facility
LE_HBa_093_N02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 767 raw
Sequence
>LE_HBa0093N02_SP6_86258 (raw untrimmed)
CCAAGTTAGTCCCCACATCTCAAATACGAGCCCCCTTTAACAAAGGCGAAAGTAGCTCTCTTTGGCGGCCGTACCCCTTATCTATTTACTTAAACATTGC
ATATATTGGATATATTGGCTCAAGATAGCTGCCGTGTTTCTTTTATATAATGTTATGAAAAACAAAAAGATCCAAGCACATATCGCCATAGTGCAAAAAC
GGGCTGTAGGAGGGATGTAACATTAA
AAAAGACAAGAGTCATGACGACTGGCTGTTCGACATGGATTATGTGAAATTGGGATATAGATATTTATGGTGTT
AGGGTATAGAGTCGAATTCGGAGGGGGAAGCTACGTCCCATTCTCGGAAGGGGATTAGTTCTTAATACTCGCTATGTCGTGCCTTATATTGTTGTTTTTC
CTTCCATATGCTTTTATGCTAGTGGATGTAGTTCCATAATTCTCTCGCTACATAAAGCATCTGGATCTCCTTGTCGTCTACTCGCGTCCTAATCACCTTC
CTCTTCTACTCTCAAACTAGTCCGTCTACCGCCCCCTCACTCCTTGTGCACCATTCGTTGAACTGACAACTACAGCATTTGACCTCAGTCCCTGATCCAT
ATGTCTCAAAGTCCTACTGCCCTCTCTAGCATAATTGTAACTTGAAATTTCACGTCCGTACTTCCTGTCCTTGCTCGTTTCTTGTTTCCTTCTCCCTTCT
AACTCACCCTCTCTTTCGATTTCTACTCTTTGTTGTCTCCAAATCATTATTCCGAGTTGGTGTGTTT
>LE_HBa0093N02_SP6_86258 (trimmed for quality and cloning vector)
AAA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.556201
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0093N02
Clone
Clone name
hba-93n2
LE_HBa0093N02
P093N02
Clone type
BAC
Contamination
none
Estimated length
95,115
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found