Clone Read LE_HBa0075G19_T7_85189

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0075G19_T7_85189
Primer
T7
ID from Seq. Facility
LE_HBa_075_G19-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1142 raw
Sequence
>LE_HBa0075G19_T7_85189 (raw untrimmed)
CTGCAGACACACACTTGTGTGATAAGTGATGCCTCGAAGGCTCTAAGAGCGGGCGGCGCACTCCGCCTATTCGTATTCTCNTGATNTATATGTCTGTTAG
AGCAGAGCTCTTCGCGGTCGGTNCGGGGTCNCAACGTATCTNATAATGTACGAGTGCANAACGTCGGACATACTCCTTTCGATCCCGCTCTCGTAATGCT
GATGCTGCGAGTGCATTACGCGCTTGTTGCGCAGCATGCCACCTACGTCAAGTGTTCGCGATCATGGTATGACAGAAACGCTGTGTGACGCTGCCCGTCA
TCGCTACCTCTCATAGAGAATCATATTCTGTAGAGGCTACANACTATGTGGTCGACCTACGTCGGATCGACACCCATAGACTTCTACTCAATGCTCGCTG
AACAGTAGTCTCTTGTCCTCACACCGAACTATGCCTTCGCACTGCAGCAAGCAACCAACCTTTGACATGCCAGATNATGCGAATACGTGCGCCAGAAACG
AGTGGTAGGAACCGTCTAGTGAATCGCGACCGACAACANCAACACGTGCTCGATNCTGCACTCTTCATGCTCGTCTCGAGCGCGATCAGCAGAGGCGATT
GTAGTGAGGCAATCCGTCCTGCATACACAGGACTGAAAGCTCGTAACCTGAGTCATGTACTAATCCGAATGTATTTGTCGTATCACTCATCTCCATTATT
GTAGCTCCGTCAGT
TATCTCGTACAACCTTCCTCTTCCGTCGCCACGTTCGCTTCACCGACTACTCGCACACACACTCACCAGCTGCCTCTGCGCACTAC
GCACTCTGGTCTTGCGTCTANCATCGACTTTCTCGGCTGATATCAAGTCCGATTATAGATCGTGTCTACGCATGCGTCTGTCGTGCTAATCGCGANCATA
GCAGACACTGGCTGACAANCGATCTCAGCTACTCGTGGACATCGAGATGTCGCTATCCGCGGACTGCTACGTCTGTCGCTCTCTGTGCACCGCAGCCCTG
CGCNCTGATCGTGACGTTTTCTGCGCAGCCTGTCGCAAGCGAAGCATTTGACACGACTAGCACATCGACGACATCACTTGTTATGAAACATTNATAATAC
ACGTGTGTNTAGATATCTCGAGACTCAGANACCACNANGACG
>LE_HBa0075G19_T7_85189 (trimmed for quality and cloning vector)
TAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.57829
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0075G19
Clone
Clone name
hba-75g19
LE_HBa0075G19
P075G19
Clone type
BAC
Contamination
none
Estimated length
104,402
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found