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Clone Read LE_HBa0040C21_SP6_8200

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0040C21_SP6_8200
Primer
SP6
ID from Seq. Facility
LE_HBa_040_C21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
742 trimmed for vector and quality, 792 raw
Genbank Accession
DU027439
Sequence
>LE_HBa0040C21_SP6_8200 (raw untrimmed)
AAGAAGGCAGTGTTCTNGGCAAAANNATAAGGGAGCATAACTANTTTGCAGTCTGACTACTTTCACCGGACACAGTAAAATAAGTAAGACTAAACAAAGT
TCAGACAAAACAAAGACTTACAAATCAACATCTAAGAAATATTAATGGAGCCACAATGGATAAGACAAATTAATTCTCCAAATACCAGCTCTGTGTCATG
TTGCAATAGAGGCTAATGTAATAGTAGCTTTGATTCATAACCACCATATAAAATAGGAGGGCGTGGAATTACTTTATTTGTTAATTATAACAAAAGGAAA
AGGACAAAACTCAGAAATGCTTTCTAGTTGCTGAAATAAATAGCAAATACCCTTAGATACCAAAAGATCAACAGACCGAATAGTTGTTCTTGCAAATACA
TATGTAAATAAGTATATTTACAGTTTACGGTTGTAACTCAAGAGAAACAGTTAAATAGAGGACTGTCGAATCGCAAAAGCTTTATTAACTAGTGGAACAA
ATTAAACTCCAGTGATAAAGGCCCAGAATTTCAAACACTGGCATACCTGCACACCAGATATAGCTTTTACAACTGTTGACTTCCCATGAGCCACATGGCC
AATAGTACCTAGAATATGAAATTACATTTCAGTAATTCAGTGTGCGTAATTAAAGTGTATAAACAGCTAGCCTGGAGAGAGAATGGAACGAAAAAAAGAA
GAGGTATATTCCATGTACGAGATAACGTAAGCACTTGCCGAATGCAAGTAATCAATAATTCTTAATTACTAGTTTACCAATGTTTATTGTTG
>LE_HBa0040C21_SP6_8200 (trimmed for quality and cloning vector)
AAGGGAGCATAACTANTTTGCAGTCTGACTACTTTCACCGGACACAGTAAAATAAGTAAGACTAAACAAAGTTCAGACAAAACAAAGACTTACAAATCAA
CATCTAAGAAATATTAATGGAGCCACAATGGATAAGACAAATTAATTCTCCAAATACCAGCTCTGTGTCATGTTGCAATAGAGGCTAATGTAATAGTAGC
TTTGATTCATAACCACCATATAAAATAGGAGGGCGTGGAATTACTTTATTTGTTAATTATAACAAAAGGAAAAGGACAAAACTCAGAAATGCTTTCTAGT
TGCTGAAATAAATAGCAAATACCCTTAGATACCAAAAGATCAACAGACCGAATAGTTGTTCTTGCAAATACATATGTAAATAAGTATATTTACAGTTTAC
GGTTGTAACTCAAGAGAAACAGTTAAATAGAGGACTGTCGAATCGCAAAAGCTTTATTAACTAGTGGAACAAATTAAACTCCAGTGATAAAGGCCCAGAA
TTTCAAACACTGGCATACCTGCACACCAGATATAGCTTTTACAACTGTTGACTTCCCATGAGCCACATGGCCAATAGTACCTAGAATATGAAATTACATT
TCAGTAATTCAGTGTGCGTAATTAAAGTGTATAAACAGCTAGCCTGGAGAGAGAATGGAACGAAAAAAAGAAGAGGTATATTCCATGTACGAGATAACGT
AAGCACTTGCCGAATGCAAGTAATCAATAATTCTTAATTACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.951467
Expected error %
0.413726
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0040C21
Clone
Clone name
hba-40c21
LE_HBa0040C21
C05HBa0040C21
P040C21
Clone type
BAC
Contamination
none
Estimated length
100,590
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found