Clone Read LE_HBa0052G16_SP6_81342

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0052G16_SP6_81342
Primer
SP6
ID from Seq. Facility
LE_HBa_052_G16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
570 trimmed for vector and quality, 829 raw
Sequence
>LE_HBa0052G16_SP6_81342 (raw untrimmed)
AAATCTGTCGCTGTGTCGAGNNAANNNNNNNNNNNNNNNNNNNNNNNAANTCNNNCNNNNNNNNTNNANAANNACCCCATAAAAACANAANAAAGAANGA
AAAAAGGANACAAACAAAACCTTAATATTGATATAAATTGTTCAATTTACACAAGCATTTAATGAATAATTCGGAAAAGCCGAAGGTGTTAAGTGGATTA
TTTAGAGTTGAGGAGAGGTTCTTATTCAGTTGATTCCAAGCAGGTGGAAAATCATGGTTGGAACTACACGAGATACGAGGAGGACTTCCACCCACGCTAT
TTAAAGCTAGGTGGGAATCAAGGTTTGAACTATCACAAGTGGTAAGATAAAGAGAAATAAAATAATATCATAATTTTGCTGAGAAAAGTGACTTTTGGAG
AAGGAGATATGACTATACAGAGAGAAACACTCACTTGTGTGAGAGGCCAAATTTTGATGGAGTGCAATTGCACTTCTGGTGAATGATTTGTTGTCACGGG
TACTTGATAAAGTTTAAAGATTGGATGAGTTGTTGAAGGGAACGACCACCCATTTTCCATCATTTCACACAAAAGTAAACTCCTATGTAGATGCAACCAA
GAGACTTAAAGTTTAGTTGAGTTCACTTTTAGCATAATTAAAACAAAAGATGACAATGCAAGATGACGATAGAGGGCTGGCTCTGGTTACTCGTATGGGA
AAGGAAGCAATAGGTAATGTGACGGAAATGAAGAAGCTCAATTCTATGAAAAAGACAAAGGAAAGGAGGAAATAGAAACACTGATCTATCAATTTTTTTT
AGGGGTTCTAGTGTTTAAGGTTTCTTAAG
>LE_HBa0052G16_SP6_81342 (trimmed for quality and cloning vector)
ATATTGATATAAATTGTTCAATTTACACAAGCATTTAATGAATAATTCGGAAAAGCCGAAGGTGTTAAGTGGATTATTTAGAGTTGAGGAGAGGTTCTTA
TTCAGTTGATTCCAAGCAGGTGGAAAATCATGGTTGGAACTACACGAGATACGAGGAGGACTTCCACCCACGCTATTTAAAGCTAGGTGGGAATCAAGGT
TTGAACTATCACAAGTGGTAAGATAAAGAGAAATAAAATAATATCATAATTTTGCTGAGAAAAGTGACTTTTGGAGAAGGAGATATGACTATACAGAGAG
AAACACTCACTTGTGTGAGAGGCCAAATTTTGATGGAGTGCAATTGCACTTCTGGTGAATGATTTGTTGTCACGGGTACTTGATAAAGTTTAAAGATTGG
ATGAGTTGTTGAAGGGAACGACCACCCATTTTCCATCATTTCACACAAAAGTAAACTCCTATGTAGATGCAACCAAGAGACTTAAAGTTTAGTTGAGTTC
ACTTTTAGCATAATTAAAACAAAAGATGACAATGCAAGATGACGATAGAGGGCTGGCTCTGGTTACTCGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.95033
Expected error %
0.578968
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0052G16
Clone
Clone name
hba-52g16
LE_HBa0052G16
P052G16
Clone type
BAC
Contamination
none
Estimated length
87,739
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found