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Clone Read LE_HBa0016N06_SP6_79354

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0016N06_SP6_79354
Primer
SP6
ID from Seq. Facility
LE_HBa_016_N06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
758 trimmed for vector and quality, 877 raw
Genbank Accession
Sequence
>LE_HBa0016N06_SP6_79354 (raw untrimmed)
GGGCCAGCTTTAAGTTTTCATTGTTGTAATCCTTGCAAGTTGATTTATGAATACGGCACATGAAATAAGATAAGTTGTTCTCTAAAGAAAATTGATCATT
GAATTACGTTCGTCAATAATTTAATTGATTGATTAGTATCTGCAATCTTAACTTTGGTAATTATATATGTGTATAATGGGGAATGTAGAAATATAAATAG
AAGAGTGCAATTCTGAATTTCTAGTTGAATAATTTGTAATTTATTATGGTCAGAATAATTTAAATTAATTATTTGAAATTATTTCATAATAGGAAGTCTC
AGTAATTAATTTTTTGGTCCTTTTAATGCCCATATTTAACTAGAACTCGAATATATTTTAAAGGAAAAAGGAGAAGTATGTGTTTTTCTCTATTCTAAAA
AAAGGGAGATTATTGTACCTTTCTCTGTTCTCCGGCCGATGAGATGTAAATCACTTATTTCTATTCTAAGAAAGGTAGAAGGACATGAGTTTTTATTTTA
TAAGAGAAGTGATATGTACATGTATTTCTATTCTAAGACATTGCATTCCTTCTCCTTGGACTAGGAAGAAATCTCTATATAAAGGGATTCTTGTAACACT
TGAAAGTAGATAAGCTTCTAAAAAAAATACTTGCCCACACAAATATTGAGTTAGTTCGGAAGTAAACATGGAATCACTGTAGAAGATCACGGAATGGTGG
TCAAGATTGTGGATTTGCTTGAAGGTTTTTGATTGTTGACTAGCTTGTGTATTCATTTAAAGGTATTTGCCCACGCTTCGAGAAGTAATTCTTGAATGAA
ATTTTAGAAACTTTATGGTGCTTAACATTATTGTATTTGTTATAGCATAAACGATGTGTAGTCTATTTATTCATGTA
>LE_HBa0016N06_SP6_79354 (trimmed for quality and cloning vector)
ATCCTTGCAAGTTGATTTATGAATACGGCACATGAAATAAGATAAGTTGTTCTCTAAAGAAAATTGATCATTGAATTACGTTCGTCAATAATTTAATTGA
TTGATTAGTATCTGCAATCTTAACTTTGGTAATTATATATGTGTATAATGGGGAATGTAGAAATATAAATAGAAGAGTGCAATTCTGAATTTCTAGTTGA
ATAATTTGTAATTTATTATGGTCAGAATAATTTAAATTAATTATTTGAAATTATTTCATAATAGGAAGTCTCAGTAATTAATTTTTTGGTCCTTTTAATG
CCCATATTTAACTAGAACTCGAATATATTTTAAAGGAAAAAGGAGAAGTATGTGTTTTTCTCTATTCTAAAAAAAGGGAGATTATTGTACCTTTCTCTGT
TCTCCGGCCGATGAGATGTAAATCACTTATTTCTATTCTAAGAAAGGTAGAAGGACATGAGTTTTTATTTTATAAGAGAAGTGATATGTACATGTATTTC
TATTCTAAGACATTGCATTCCTTCTCCTTGGACTAGGAAGAAATCTCTATATAAAGGGATTCTTGTAACACTTGAAAGTAGATAAGCTTCTAAAAAAAAT
ACTTGCCCACACAAATATTGAGTTAGTTCGGAAGTAAACATGGAATCACTGTAGAAGATCACGGAATGGTGGTCAAGATTGTGGATTTGCTTGAAGGTTT
TTGATTGTTGACTAGCTTGTGTATTCATTTAAAGGTATTTGCCCACGCTTCGAGAAGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.92778
Expected error %
0.0368685
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0016N06
Clone
Clone name
hba-16n6
LE_HBa0016N06
P016N06
Clone type
BAC
Contamination
none
Estimated length
127,431
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found