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Clone Read LE_HBa0016M24_T7_79343

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0016M24_T7_79343
Primer
T7
ID from Seq. Facility
LE_HBa_016_M24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 928 raw
Sequence
>LE_HBa0016M24_T7_79343 (raw untrimmed)
TCCCTGTCCAATCTTTTTTTTCCGGTAAACTCACNATTAANGCGCATAGCAGGTCTCCCCCTACAAAAGAGAGGGGANNNNNNANNNNNGNGGAGGGGGN
NGGNANNANNNANNNNNNANANGNANNNANNNAAGGAAAAAAGAANGGANAAANNNNNATTTTCTTAAAAGGGGAGGANGGNAGGNAGAANNANNNGGGG
NGAGAGGAGAGGGGGAGAGAGGGGGAAAGNGAAGNAGAAGAAAAGAAGGGNAGGAGAGGAGGNAGGANAGGAAAANAGAAAGAAGGGGGAAGAGGAGGGG
AAAAAGGAGGANGAGAAGGNGAGAAAGAGAGGGAGGAGGAAAAGAGGGAGNAGAAAGGNAAAGGGNGAGAAAAGAANGAGAGGGAGAGAGANAAAGGAAA
AAGAAGAAGNGNANAANGANAAGAAAAANGAGAAGGAAGAGAGAGGAAGAGGAGGAGGGAAGAAGGAAAAAGGGANAAAAGAGGAGGAAAGAAAGGGGGA
GGAGANGAAGNGAGANAAANAGAAGGAGAAAAAANAAGAGGAGAAGAAGGAAGAAAGAAAAGAAGAGGAAAGAAGAGNGGAAGGGAAAGGGGAGAGAGAG
GAAGAAAGAAAAGGNNAGAAGGAAAGAGAAAGAGAAAGAAGAAAANGAAGAAAAAAAAAAAAGAAAANAAGGAAAGAGAGAAAAGAAGAAAGGGAAAGAG
AANAGAGAAGAAAAGAGANGAAGGAAGGGGAGGGANGAAGGGAAAGAGAAAGGAAAGAGGANAGGAAAGAAAAAAAGAAAGAGGAGAAGAAAAGGAAGAG
AAGGGAGAGGAGAGAGAGGAAAAAGAGNAGAAAGAGGNAAANGAGGAAGAGGGNAGANAGAGGGAGAGAGAGGGAGAGGGAGAAANAGGAGAAAGAAAGG
AGGAGGAAGGGGAGAGAGGAAAAAGGAG
>LE_HBa0016M24_T7_79343 (trimmed for quality and cloning vector)
TTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.77628
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0016M24
Clone
Clone name
hba-16m24
LE_HBa0016M24
P016M24
Clone type
BAC
Contamination
none
Estimated length
58,188
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found