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Clone Read LE_HBa0033K05_SP6_7016

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0033K05_SP6_7016
Primer
SP6
ID from Seq. Facility
LE_HBa_033_K05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
638 trimmed for vector and quality, 969 raw
Genbank Accession
DU026395
Sequence
>LE_HBa0033K05_SP6_7016 (raw untrimmed)
GAATTGTCCTATTTTAGGTGAGCATCTTGGTTGGAGAAAAGGATTGTAAACGAGAATTGCTTGTTAGAGGTCTGCGAGATGGACTTCATATCACCATCAA
GATTCCATAGCAATAGTTGCCTTCTCTTAAGCTAGGAGAATCCATTATACCTAATTTGTTTTCTAGATATTAATGCATGTATTTAGATGTAGATTCTTAT
TCAGATTCAGACGTCTTAATCTTAATGGAAACAAATGAGGCTTAAGTCGGTTTTACTAACGTCAATAAGAACTCCTAAACTAATTCATACTTATCCTACT
GAATAAATCAGTTTTTGAGAGAATGTGTGGGTCTACTATCATTGAATAGAGCGAGTCCATTGACTCAGAACGGGGAGAACATAAGCAGATTTATGTCAAA
ACCTCCTTGCTAAGAGGGAGTAAAACCATGACCTGTCTCATAAGATTTTCAACTATTTTCGGGAATCTCTTCTAGCAAAAGTGAAACCCAATTACAACCA
AGTGAAAAAGAAGTTATTAATCTCGCGACTAAGTAATAACTCTATTACTTAACGAGCCTGAGCACATACGACACCGCCCACTAATCTATCAACACTAGAC
AGACTTAGAATTCGACTGAGTAGTTACCACACTGCCCACTAAATCAACTAGCACCCTGGAGACATAGAATTTTAACTAAGCACCAAAGACTTCTGCCTAT
TAAATCAATTACTTTTGAGTTAGAATTTTCAAACACACAATATCTGAGTACTTTATAGATAAGGAACAAATTTACAATGCCAGCACAGAATTCCGATGAA
GACTTAAGCTTGCAGATTCTTCAGGTCCTTGTAGTTCTTGAGTATGATTCTTGACTTGAGTATTAGACTTTGCAAGAGCTCTTGAAAGTATTGAATTGCC
AAAACTAGGGTTGTTTCATTTGAAACTATTCTTGATAAAGATAGTCGACCCTTTCAGGCCTGTCTTTGC
>LE_HBa0033K05_SP6_7016 (trimmed for quality and cloning vector)
TCATATCACCATCAAGATTCCATAGCAATAGTTGCCTTCTCTTAAGCTAGGAGAATCCATTATACCTAATTTGTTTTCTAGATATTAATGCATGTATTTA
GATGTAGATTCTTATTCAGATTCAGACGTCTTAATCTTAATGGAAACAAATGAGGCTTAAGTCGGTTTTACTAACGTCAATAAGAACTCCTAAACTAATT
CATACTTATCCTACTGAATAAATCAGTTTTTGAGAGAATGTGTGGGTCTACTATCATTGAATAGAGCGAGTCCATTGACTCAGAACGGGGAGAACATAAG
CAGATTTATGTCAAAACCTCCTTGCTAAGAGGGAGTAAAACCATGACCTGTCTCATAAGATTTTCAACTATTTTCGGGAATCTCTTCTAGCAAAAGTGAA
ACCCAATTACAACCAAGTGAAAAAGAAGTTATTAATCTCGCGACTAAGTAATAACTCTATTACTTAACGAGCCTGAGCACATACGACACCGCCCACTAAT
CTATCAACACTAGACAGACTTAGAATTCGACTGAGTAGTTACCACACTGCCCACTAAATCAACTAGCACCCTGGAGACATAGAATTTTAACTAAGCACCA
AAGACTTCTGCCTATTAAATCAATTACTTTTGAGTTAG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954031
Expected error %
1.86651
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0033K05
Clone
Clone name
hba-33k5
LE_HBa0033K05
P033K05
Clone type
BAC
Contamination
none
Estimated length
124,287
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found