Clone Read LE_HBa0001N12_SP6_646

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001N12_SP6_646
Primer
SP6
ID from Seq. Facility
Le-HBa001_N12-SP6.ab1
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
482 trimmed for vector and quality, 1332 raw
Genbank Accession
Sequence
>LE_HBa0001N12_SP6_646 (raw untrimmed)
TGGATATCACGTAAATCCTTTCCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAA
ACCTGCTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATAAAAA
CCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGA
ATTGATGGAAGGAGATTTAGGGGATCGGGTGTCACGAACCAACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGT
GTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCCGACACGTAGAATTAGGGGATCAGTTGTCACGAACCGACACGTAGAATTAGGGGA
TCGGGTGTCACGAACCGACACGTAGAATTAGAGGATCCGGGTGTCACGAACCGACACGTAGATTTTAGGGGATCGGGTGTCGCGAACCGACACGTAGATG
TAGGGGATCGGAGTGTCACGTACCCACACCAATAGGACCTAATGAATCATGAGGGATCGAAATGTTCCCATACCAACACCAGAGGATTCAAAAAAAATGA
GGAAGCCGACGTGCCCCTACCCAATCAGTACGAACCAAATATATTGAATCTTTAAAAATTGTAAATATACGCATGTGAATCAAACCAATTCACCAAGGAT
CCTGGAGTAAAGCTGAATTTAATTCCGTGACTCGTCCGGCGCGGTTACGCACTTAGCACTAATGAGCACGCCCCGAATCACAATCACCCTTCTGATCTTA
TCCACACTCTCTGACACTTATTCTCTCTCAGTTTTAAAATTGCTCCAGCTTCCACCACACTGCTCCCACTTAACTACGTACTCCCGCCCGCTTATATACT
ATGCCTGTGTAAATTTTGGGTGAGTGCCAATAATGGCGTCGTGGTCCTCCGCTCCATGTTAATTTTTACGTTAGTCCTTACTGCATGTCACAAGTTTTGA
TGGATTATGTTCGTGCTACTATTACATAAAAAATATTATGTTGATATTTTTTATAATGTATTGTATGTGTTGTCGTTCTAATTCATATACTATTTGGAAA
CTTCATTTTCGTCATTGATTTCTCCCCTTGCCATCTTCTTATGTCTTCTCCCCCGCTTCTGCTCTTTCTCTTCTTGGTTTGAAATCACCTAAGGTGCCTC
AGATGCTTGGTTCTGTTGCACGAGGGTTGGAA
>LE_HBa0001N12_SP6_646 (trimmed for quality and cloning vector)
GGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCTGCTATGTGCTTAATTGTATGCA
TGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCC
TTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATGGAAGGAGATTTAGGGGATC
GGGTGTCACGAACCAACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGG
GGATCGGGTGTCACGAACCCGACACGTAGAATTAGGGGATCAGTTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.958878
Expected error %
0.236275
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001N12
Clone
Clone name
hba-1n12
LE_HBa0001N12
P001N12
Clone type
BAC
Contamination
none
Estimated length
121,619
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found