Clone Read LE_HBa0012E09_T7_5969

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0012E09_T7_5969
Primer
T7
ID from Seq. Facility
LE_HBa_012_E09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
496 trimmed for vector and quality, 942 raw
Genbank Accession
DU025546
Sequence
>LE_HBa0012E09_T7_5969 (raw untrimmed)
ATGGATCCGGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGAGAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTT
TATGCTTTCATAGCATACTCTTAATAGAGAATGATATGTATTGGGTAGTTTTGTAAACCCTTCTATGTGCTTAATTGTATGCATGCATGAATGTGATTAT
ATGATTGTGATGAAATAAGCATGATGAAGCTATTGAATCCCAAGTCTTGATAAAAAGCCAATCTCTTGTTAATGATGATGCCTTGGTATGAAAGAAGGCT
TGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTATAAGAGAAGGTT
TGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAATCGATACATAGATTTAGGGGAT
CGGGTGTCACGAACCGACACATATATTTAGGGGATCGGGTGTCACGAATTGACACGTAGATTTATGGGATCGGGTATCACGAACTGACACGTAGAATTAG
GGGATCTGAGTGTCACGTTTCGACACATAATACTAAGGGATCGGAGTGTCACGTACCGACTCAAAATGAATAAAGATTAATGAAACTTGAAAGGATGATA
ACTTCACTCTGTTTAATGGATCTTATTTCCCTTAAGAATATTGGTATTTAAGCGCTTTGCTTTTTTTCACTCCTTTTACTTCATTGGAAATTGTAAATTG
GTTTAATCTTCTCACCTAGTTTGTACCTCTCTTTGATAAATCTTATTTCATTTTATTATATTTCTCCCTATGTCCTTTACTTTCTCTTCCAATCTCCTTG
ATTTTTTTTCCAATTAAAAATGCTATCCTCAAAATCTTCTCA
>LE_HBa0012E09_T7_5969 (trimmed for quality and cloning vector)
AGTCGACCTGCAGGCATGCAAGCTTTGAGAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTTATGCTTTCATAGCATACTCTTA
ATAGAGAATGATATGTATTGGGTAGTTTTGTAAACCCTTCTATGTGCTTAATTGTATGCATGCATGAATGTGATTATATGATTGTGATGAAATAAGCATG
ATGAAGCTATTGAATCCCAAGTCTTGATAAAAAGCCAATCTCTTGTTAATGATGATGCCTTGGTATGAAAGAAGGCTTGATGAACTAAAGTAATGAGATT
GATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTATAAGAGAAGGTTTGATGAATTGATAGAATGAGATT
AGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAATCGATACATAGATTTAGGGGATCGGGTGTCACGAACCGACA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.941969
Expected error %
0.22827
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0012E09
Clone
Clone name
hba-12e9
LE_HBa0012E09
P012E09
Clone type
BAC
Contamination
none
Estimated length
140,044
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found