Clone Read LE_HBa0012E09_SP6_5968

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0012E09_SP6_5968
Primer
SP6
ID from Seq. Facility
LE_HBa_012_E09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
470 trimmed for vector and quality, 921 raw
Genbank Accession
DU025545
Sequence
>LE_HBa0012E09_SP6_5968 (raw untrimmed)
TTTACCCTCTCCCTAAATTACCGAAAGCAGATGTATTTACTCTCTTTCAAATTAGTTGTTTATTCTATATCACTAATAAATTAGAATGAGATATTATCAA
TAAATATAGTCTAATAACTACTAAAATATGAAGATAAATTGAAAAAAGATTGACATGTACCATAACTAATTGTCTTACCTAATTTAAAATTGATCATGCA
TATATAATTGCATTCAATTAACTTGTATTTGTAAAGGAGCATAACTCATAAAATACTATATCGATTACATTTATATTCCTAATAATGATTCAACTTATAA
TAATGAAAAATCTTCAATTTTTGTGACACAATCCAAATATAAACTTTTACAATTTTCTTTACCAAAAAAAATGAATTTAAAAATTATTTAAATCCTAAAG
TTTCAAATAGTCTAATTTTTTTAAAAAAGACCTAAAATTGGGACATAACCTACATTCAAACTCGTGACCTAGACTATTCGCTTAAACTTCAACCATTCGC
GTTGCAATATCATTCGTTTATAATTATGAAAGTAAATGTATTTAGTCCCTTTCATATAATGAATATCACTAGGAAATTTAAAATGTGATATTTATCAATA
AATTTTATTCTTAATAACCCCCTAATTCGCGACCTATAAAACTATTCCTTTTAACTATAACAATTTGGGCGCTGCCATTACTTTCTTTTCATATTACCAC
AAATCTGTTACGTCTCTTTACATATCACTAAAAATTTTTGAAATTAGAGATTAATCAAAAATTCTTAGTCTTATTAACCCCTAAAAATGGTGAAGTATTA
ATTTTATTCAAAGGGTTGAATTGGTTACTATAACCAAAATTTTTATTATCAACAATTTATAAACTTTGGTTCATATTCACCATGAAAATATCCATAATTT
CCTTTCTTGATATTTCATATT
>LE_HBa0012E09_SP6_5968 (trimmed for quality and cloning vector)
AAAGCAGATGTATTTACTCTCTTTCAAATTAGTTGTTTATTCTATATCACTAATAAATTAGAATGAGATATTATCAATAAATATAGTCTAATAACTACTA
AAATATGAAGATAAATTGAAAAAAGATTGACATGTACCATAACTAATTGTCTTACCTAATTTAAAATTGATCATGCATATATAATTGCATTCAATTAACT
TGTATTTGTAAAGGAGCATAACTCATAAAATACTATATCGATTACATTTATATTCCTAATAATGATTCAACTTATAATAATGAAAAATCTTCAATTTTTG
TGACACAATCCAAATATAAACTTTTACAATTTTCTTTACCAAAAAAAATGAATTTAAAAATTATTTAAATCCTAAAGTTTCAAATAGTCTAATTTTTTTA
AAAAAGACCTAAAATTGGGACATAACCTACATTCAAACTCGTGACCTAGACTATTCGCTTAAACTTCAAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.872077
Expected error %
0.301472
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0012E09
Clone
Clone name
hba-12e9
LE_HBa0012E09
P012E09
Clone type
BAC
Contamination
none
Estimated length
140,044
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found