Clone Read LE_HBa0123O23_SP6_58700

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0123O23_SP6_58700
Primer
SP6
ID from Seq. Facility
LE_HBa_123_O23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
603 trimmed for vector and quality, 863 raw
Sequence
>LE_HBa0123O23_SP6_58700 (raw untrimmed)
CAGAAAATATTTGGTGTTGATGGGAACAGGGGTCGGTCCTATTAACGCCAAATTCCTAAAGAGGTACTACCCTTGCCCTTTGATGATGCTTCTTAACCTA
CAAGCCTAAGCTACATGTTACTCCAGTCACACAAGAGTATAAATTGTGTATGACACCACAACAACAAAAAAATACTCAATTCCCCAAAACTACGTTGTGG
CTTTATCCTGTTTACTGAGGTATGTAGGCACTTAGAACCATATTCTAAGTTGAGTTGCACGAGTGTAAAAAAAATCACATGTTCCCACTTGATCTTATAT
GAAAGTTGAAGCAATGGAAATCAATAAGTATTTTCTTTTATCTTTTGTCTCATCAAACTTTAGACTTGTACGAATTATTGATTGGTCAATAGATGGGGGC
AAGCCTTTAAATAAGTATGAGTTCCGTTAACATTATGCTTTAAGTTTCTTTGAGATTGAAGTTTTCAAATTCCCTGAGTATGCAAGTTGAAATCTTCAAA
TCCTCCAAGTATGCAAGCTAAAGTCCTCAAATTCCCCGAGTATGCGAGATGAAGTCTTCAAATCTTTCAACAATGCAAGTTGAAGTCTTCAAATACTTTA
AGTCTCCAGGGTGGAAGTCTTCAGATTCTTTGACTCTGCAACTTGAAGTCTTCCAATTCTTTTCTGCAAGCGGGAAGTCTTCAATTTCTTTAAGTCTGCA
AGTTGAAGTCTTAAAATCCTTCCAGTCTGCGAGTTAAAATATGTATGTCTACCAGTTGGAGTCCTCATTTTCTTTAAATCTCCAGCTGAAGTCTTTAATT
CTCCAAGAATTCAAGTTAAATTCCCAATTAACAAGTCAATTCTTTTAAATCTTAAATCCGGAG
>LE_HBa0123O23_SP6_58700 (trimmed for quality and cloning vector)
TCGGTCCTATTAACGCCAAATTCCTAAAGAGGTACTACCCTTGCCCTTTGATGATGCTTCTTAACCTACAAGCCTAAGCTACATGTTACTCCAGTCACAC
AAGAGTATAAATTGTGTATGACACCACAACAACAAAAAAATACTCAATTCCCCAAAACTACGTTGTGGCTTTATCCTGTTTACTGAGGTATGTAGGCACT
TAGAACCATATTCTAAGTTGAGTTGCACGAGTGTAAAAAAAATCACATGTTCCCACTTGATCTTATATGAAAGTTGAAGCAATGGAAATCAATAAGTATT
TTCTTTTATCTTTTGTCTCATCAAACTTTAGACTTGTACGAATTATTGATTGGTCAATAGATGGGGGCAAGCCTTTAAATAAGTATGAGTTCCGTTAACA
TTATGCTTTAAGTTTCTTTGAGATTGAAGTTTTCAAATTCCCTGAGTATGCAAGTTGAAATCTTCAAATCCTCCAAGTATGCAAGCTAAAGTCCTCAAAT
TCCCCGAGTATGCGAGATGAAGTCTTCAAATCTTTCAACAATGCAAGTTGAAGTCTTCAAATACTTTAAGTCTCCAGGGTGGAAGTCTTCAGATTCTTTG
ACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962665
Expected error %
0.27933
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0123O23
Clone
Clone name
hba-123o23
LE_HBa0123O23
P123O23
Clone type
BAC
Contamination
none
Estimated length
84,020
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found