Clone Read LE_HBa0101P10_SP6_57186

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0101P10_SP6_57186
Primer
SP6
ID from Seq. Facility
LE_HBa_101_P10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
0 trimmed for vector and quality, 858 raw
Sequence
>LE_HBa0101P10_SP6_57186 (raw untrimmed)
AAAAGCCGGCCTGCACGTCGACTCTAGAGGTCCCCGGGCACCGAGCTCGAACTCTAGCTCCGCGCCCTGATGCATGATCCGGGTTTAAACCCAGTACTCT
AGATCCTCAAGAGTCGACCTGCAGGCATGCAAGCTTGAGTATTCCATAGTGTCACCTGATCCCTGTGTCAAATTGTTAGCCGCTCACGATTCCACACCCC
CACCAGCCGGAAGCACAAAATGCAAAGCCCGCGGTGCCTAGGTAGTGAACTAACTTACATAAAATGCCCTACTATCACTGCCCACAAACCACCCCCAAAC
CAAGGTATGCCAACCACATTTAGTACTCTCCTACCCCCTGCCCGCCGCGTCACTCACTCTTTCTATTCTCACCCACATCCTCCTGTCATTCATCGGCCGT
TTCCTTCCCCTAATATACCATAAATTACCTCCTAGAGTTTTCATCCCCCCATCTACCCTTCCCCACAACAACACAACTATAAACTCCTGCCATCTCACCC
ACATTGCTCGGTATCCCCCCTCCATCTACCCTCTCCCCTCCCTCCCCCTTCTCTCCCCCCTTCTCATCCCCTTTTTTTTATTCCTTCTGTCCGCTGACCT
CCCCCACACAGTGACATCCCTACACTCCCCTGACCCCAAGCCCCACGCCCCACCACCCCCCAAAATAACTCCTAACTTACTCCTTCTTCTTTTCTTCTCT
TTCATACTCCTTTTTCTCTTTTCTAATGTTCCCTCCCCCCCTCACCTCTCCCTTATCTTCCCCGCTACCGACGACACGTAGCCAATTACACAAAATATCA
TCAACCCTGCAAAATATATCTCATATATCATATACTCGCTTCTTCAACTGTTCACACA
>LE_HBa0101P10_SP6_57186 (trimmed for quality and cloning vector)

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Anomalous sequence (probable bad read)
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
Unknown anomalous vector sequence pattern
Quality trim threshold
14.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0101P10
Clone
Clone name
hba-101p10
LE_HBa0101P10
P101P10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found