Clone Read LE_HBa0101F20_T7_56727

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0101F20_T7_56727
Primer
T7
ID from Seq. Facility
LE_HBa_101_F20-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 790 raw
Sequence
>LE_HBa0101F20_T7_56727 (raw untrimmed)
CCCGGGGGGGTTCTTCTATAGTCGACCTGCAGGCATGCAAGCTTATGATATTCTCAACGCCTTCATCCTCTGGGGAGGTGTGCATGATCCATGAAACGCT
GTGACGTACTCCTCTTCCTATTCTATTCAATACTGTTAACACATCGAAAGGTCCCTCATGTATATGCCTCAACTACAATACATCGCCTAAATCTTTTAAC
TTGCTTGTTTTCTTGAGAGATTATTCTCCTCTGTATTTCTCATCGACTCCCCTATCTTTGTGCTTTCACTCTTTTATTGTACTTCTTTTTATTTGAGGTT
CATTTTTTATTCCACAATGGACACCTTCATCCCTATGCAACACCCATATATAGTCTTAAACTTACATCTTACTCTTGAAATTCTACTTTGTTTACAACAA
CAATGTACAACATATCATGCTTCTCGTTTCGTGATCTACTTCTCGATATCTACTTGTTAGTATAGCCTACTAATCAATTATCACGACACGTACAGTTGCG
AAGATTATTATATTCTCCTTTTTCATTTTATTATACCCCCCCCCCCCCAAAGAAGCTTCATTTATCGACTGGTGCTAATATACCTTATATTGTCCATATT
CATTTTTCCCATTATTTTTTTTTTTTTCTTTTTTCTTCTCTAACCCGATTTCATCTCTTTTTTTTTTTTGTGCTATATCCATTTGCTCTTCTTTTTTTTT
CCCACTCCTCCCTTAACATTACTATCTCTTCCACGTTCTCATAGTTCTCTCTCCATTTCTTTACTTTCAACCATTATAACTCCATTCTCG
>LE_HBa0101F20_T7_56727 (trimmed for quality and cloning vector)
TTGA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.921494
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0101F20
Clone
Clone name
hba-101f20
LE_HBa0101F20
P101F20
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found