Clone Read LE_HBa0088D09_T7_55841

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0088D09_T7_55841
Primer
T7
ID from Seq. Facility
LE_HBa_088_D09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
694 trimmed for vector and quality, 933 raw
Sequence
>LE_HBa0088D09_T7_55841 (raw untrimmed)
CCTAAACTCGGTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTGGGGAAAAAATTCATCACTTCGTAATTGCAGGATGATCAAATCA
AACGGTCTCAAGCTAAATTGGTTAATACAATTGAGAAGAGGTCCCTTTTACCAAGACTTGTCTTTCTCTCGATTCAATGTGCATCATCATCTGTCAAGGG
AAATGTTGAAGCAAATGGTTCTGTGTTTGATCCTAAGCTATCATCGGAGCTGAGATTGTTACTCGAGCGGTATGCCAATATCTTGGGATTATCCTTCCAG
GATGCTGTAGGGATGGCTTTTGATATTTCGAGTGGTCTTAAGGATGCAGAGGTAAATTCTTTTGTGTCATACTCTGAGAAACTGAGGATGTTTCCAAAGC
TATTATTTTTTTGTTTGTTAAAGTACTTTTTGTTCTTTGTTTCTTGCTTCAATTATGATAATAGAAGCATACTTGTGGAGTCATTATCATGAATTTTGTT
GTTATTTGTTATCTCTTCACATCATTGTAATGGTTGGGATAGTCTTCAAGGAGAATTAGAATTCCTAACTGTACAAGTTCAACATAGAAATGGGTCATTC
ACCGAAGAAACAGACGAGGTGCATTACTGCATTCCTCAGATTGAAATTTCAGAACTTACATCTACTGAGATTTCAAAGAGGCTTGGTCTCGAATAAACTT
TTTATTTGTTTGGTGTTCAACATTAACTTTTATTAATAATACGGTCGTTTCCAAATGCCTTAAGCTATAGGTTTATTCCATACACGTTTGGAACCCTTCG
GTTTTTCCCCTTTTTCCCTACATCCCGAGGATATATAAAAGGTAATTTGCATTATGCTCGATGCGTAGGAGTAGCCTCTTATTCCTCTATAATGTAAAAA
CACAGAACTCTTGTTCCCGAATACCAAATGATC
>LE_HBa0088D09_T7_55841 (trimmed for quality and cloning vector)
AGCTTGTGGGGAAAAAATTCATCACTTCGTAATTGCAGGATGATCAAATCAAACGGTCTCAAGCTAAATTGGTTAATACAATTGAGAAGAGGTCCCTTTT
ACCAAGACTTGTCTTTCTCTCGATTCAATGTGCATCATCATCTGTCAAGGGAAATGTTGAAGCAAATGGTTCTGTGTTTGATCCTAAGCTATCATCGGAG
CTGAGATTGTTACTCGAGCGGTATGCCAATATCTTGGGATTATCCTTCCAGGATGCTGTAGGGATGGCTTTTGATATTTCGAGTGGTCTTAAGGATGCAG
AGGTAAATTCTTTTGTGTCATACTCTGAGAAACTGAGGATGTTTCCAAAGCTATTATTTTTTTGTTTGTTAAAGTACTTTTTGTTCTTTGTTTCTTGCTT
CAATTATGATAATAGAAGCATACTTGTGGAGTCATTATCATGAATTTTGTTGTTATTTGTTATCTCTTCACATCATTGTAATGGTTGGGATAGTCTTCAA
GGAGAATTAGAATTCCTAACTGTACAAGTTCAACATAGAAATGGGTCATTCACCGAAGAAACAGACGAGGTGCATTACTGCATTCCTCAGATTGAAATTT
CAGAACTTACATCTACTGAGATTTCAAAGAGGCTTGGTCTCGAATAAACTTTTTATTTGTTTGGTGTTCAACATTAACTTTTATTAATAATACG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.950861
Expected error %
0.450834
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0088D09
Clone
Clone name
hba-88d9
LE_HBa0088D09
P088D09
Clone type
BAC
Contamination
none
Estimated length
121,743
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found