Clone Read LE_HBa0074N01_SP6_55536

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0074N01_SP6_55536
Primer
SP6
ID from Seq. Facility
LE_HBa_074_N01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
581 trimmed for vector and quality, 875 raw
Genbank Accession
DU080161
Sequence
>LE_HBa0074N01_SP6_55536 (raw untrimmed)
CGGCGGACAAATTCCCAGGGACTTGAACTGAATATCGCATTTTCCCCCCAACTTCCATGCTCATGGTGTCAGATCTCTTCCCTTAGGGCCGAATGCTCCA
AGTCCCTGTTCCTTCATTTGTCCCTTCAAGATTCTTGCCGCTCAGATATATGACTCGCGTTCGTTAACATTCAAAATTTCATTTGAATCTGCTGATTTGT
TGACTTATCCAGTTCAATTATTTCCTTCCAATTTCCCATTTCAAAGAATTGTTTGAGCAGAAAAAACCAACTGCATATATCTTATAGAAACTATAAACAT
GAGTGATAGGTCTAAAATCCAAAGATCATTATGGTCTGTGTTTTGAATTCCTGTAACTCCCATCTTTTTATGGTTTTGATTGAGAGTACCTCCCAACGAG
ATGAACACATGTGCCCAGGCACACTCAAAATGTTACTCCTTTGTGCCATTTTATAACACATACTTCCCATTTTAATTTGTCCCCAAAAAAGTGACACCTT
TCTATATCAGAAGTAATTTAACTTAAATGTTTTAATTTATATTACTAATGATATGATTTTATAGCCATATAAATCTCATTTTAAAACAAGTTGTTCAAAG
TCTTTTTTCTTTCTTAACACCTTGTACCCGGTCAAACACCTCCACAGAAAATGGGATGGAGAGTGACTATTCTTTGAAGTTAGATGGGAGTATCAATGCC
GGAAAATACTCCTTCGCCACCCCCAACATAGGTTGTCGATTTCTCACCTTGGGCCGGAATAAAAAAAATCCTTATGGTAGCCAAATGGCATTTCGGTTCA
TACTACTTTCCTAGTAATCTATCTACTCCATGACGCGGCGCACTCCCACCTCGCCATATATCCCACTACCTTTAT
>LE_HBa0074N01_SP6_55536 (trimmed for quality and cloning vector)
ATCGCATTTTCCCCCCAACTTCCATGCTCATGGTGTCAGATCTCTTCCCTTAGGGCCGAATGCTCCAAGTCCCTGTTCCTTCATTTGTCCCTTCAAGATT
CTTGCCGCTCAGATATATGACTCGCGTTCGTTAACATTCAAAATTTCATTTGAATCTGCTGATTTGTTGACTTATCCAGTTCAATTATTTCCTTCCAATT
TCCCATTTCAAAGAATTGTTTGAGCAGAAAAAACCAACTGCATATATCTTATAGAAACTATAAACATGAGTGATAGGTCTAAAATCCAAAGATCATTATG
GTCTGTGTTTTGAATTCCTGTAACTCCCATCTTTTTATGGTTTTGATTGAGAGTACCTCCCAACGAGATGAACACATGTGCCCAGGCACACTCAAAATGT
TACTCCTTTGTGCCATTTTATAACACATACTTCCCATTTTAATTTGTCCCCAAAAAAGTGACACCTTTCTATATCAGAAGTAATTTAACTTAAATGTTTT
AATTTATATTACTAATGATATGATTTTATAGCCATATAAATCTCATTTTAAAACAAGTTGTTCAAAGTCTTTTTTCTTTCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.93459
Expected error %
1.21386
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0074N01
Clone
Clone name
hba-74n1
LE_HBa0074N01
C00HBa0074N01
P074N01
Clone type
BAC
Contamination
none
Estimated length
120,646
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found