Clone Read LE_HBa0041K02_SP6_43106

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0041K02_SP6_43106
Primer
SP6
ID from Seq. Facility
LE_HBa_041_K02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
609 trimmed for vector and quality, 799 raw
Genbank Accession
Sequence
>LE_HBa0041K02_SP6_43106 (raw untrimmed)
TTTTTGGGCCCCTAGAAGAAAAGAAACGGAACTCGAAGAAGACGGAAACGCGGGGAGATAGACAGGTTCAGGTAAAATTAGAAGGGTATGAACTCGGCCC
GTGTGTGTCTTTTCATTCTTGGGCCGGGCTGATTTCGCGGCCCACGTAGCTTGCGTTTGGAATGTGATATGAAGTCTCAGGTAAGATTTCAAATCACAAT
CTCAAATTCTTGAAAAAGCATGAAAATCATTAATCATCCACATCAATGTTGCTTTCAAGAGAAAATTTTGCTTCTTGGATTTGTCATAAGTTAGTGCACC
GTCCTTCCAACATCAATAGTAATCCTGATTTTGTGCGGGTCGCTTAGCTGAAAGAATGGAGTAAGGGCAGTATTATGCATGGGAACGTGGATCTTCAGAA
TCAACATGTGCTGGCTTAACTAGCAGAATTGAAGAAAATCCAAAATCACAGGTCTCAGTGGGAAGATGATTTAGTTGCAAGAATGCCCGAGTTTGAAGAG
ATTACTTGAAGACAAAGATCTAGGGCGACATGGCTTAAGGCGCTCTTGAGCCTCATGGACAATATCAGAGTTTGTGCTCCCACGTCCAAATGGGGATTTC
CTCCAAACACGGTTGGGAAATTGACTTGGTAGAATTTTATTTACTGTACTAAAACCCATTACAAAATTTGGTTAATAAAATTTTAAAACCCTTTGGAAGA
AAGAGTAAAAGATGGGTAACCAAACTAACGGTTAAAAGAGCTTTATTCCCTTACCTCCCTCCCATTATACCTTACTTTAAATTACGGATCCCCTGTATC
>LE_HBa0041K02_SP6_43106 (trimmed for quality and cloning vector)
AAGAAGACGGAAACGCGGGGAGATAGACAGGTTCAGGTAAAATTAGAAGGGTATGAACTCGGCCCGTGTGTGTCTTTTCATTCTTGGGCCGGGCTGATTT
CGCGGCCCACGTAGCTTGCGTTTGGAATGTGATATGAAGTCTCAGGTAAGATTTCAAATCACAATCTCAAATTCTTGAAAAAGCATGAAAATCATTAATC
ATCCACATCAATGTTGCTTTCAAGAGAAAATTTTGCTTCTTGGATTTGTCATAAGTTAGTGCACCGTCCTTCCAACATCAATAGTAATCCTGATTTTGTG
CGGGTCGCTTAGCTGAAAGAATGGAGTAAGGGCAGTATTATGCATGGGAACGTGGATCTTCAGAATCAACATGTGCTGGCTTAACTAGCAGAATTGAAGA
AAATCCAAAATCACAGGTCTCAGTGGGAAGATGATTTAGTTGCAAGAATGCCCGAGTTTGAAGAGATTACTTGAAGACAAAGATCTAGGGCGACATGGCT
TAAGGCGCTCTTGAGCCTCATGGACAATATCAGAGTTTGTGCTCCCACGTCCAAATGGGGATTTCCTCCAAACACGGTTGGGAAATTGACTTGGTAGAAT
TTTATTTAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.977586
Expected error %
0.315516
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0041K02
Clone
Clone name
hba-41k2
LE_HBa0041K02
C02HBa0041K02
P041K02
Clone type
BAC
Contamination
none
Estimated length
108,594
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found