Clone Read LE_HBa0241N03_T7_403097

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0241N03_T7_403097
Primer
T7
ID from Seq. Facility
LE_HBa_241_N03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1222 raw
Sequence
>LE_HBa0241N03_T7_403097 (raw untrimmed)
ATGTTCCTCTTAAAGGTCTACCCGTGCATGACAATGCCTAGACTTTGAATGTATATCGTATTAGCAGTCTTCCCCTATTGTAAGGTTTGGCTGATACATC
AGTGGTTACATAATGAATGGAATTCACTAGTCCCCTTAAATATGATTATACCAGCCTCATCTAATGTCCTACAACTAACAGTACTGTAGCTCGTTAAGGC
ATTAAAGGTAGTAGAAGCGCTGGTGTGTGCCTTAATTGAGATGATGCTAAACTCATCATTATATTTGCGTTGACGCATCACTTGCCCGACTTATCCAGTC
GGGTAAACCATGTCGATGCCTGCATGCACTTAATAGAATCTGTCCAACAGCAAATCTCCTTGCGTACTGCCCGAAGCCATCACATCTGCATCTCTATGTA
TGTACATAATATAACGTCGAAGTTTTGGTGCGATATTTCTCACACTCTTGAGTCACTGTATAACCATGGATAGTACTAAACTTTACTGTCTTATAAGTGT
GACAATGTTTACGTGAACTTATTAATTACATTATTGGCAGTCCCCATATGGGATAAACTGAATAAATAATCATGATGTGTGTTTAAAGTATACTTAGCAA
AGATTAATAAGAATGAACGGTGTTTCATATCATTAAAACAAAAAATTGCAATGTATTCATAGATTTATCATATAATGATGGACATTATTATATGAAATGC
TTGGTTAGTACCTTTGAATGAAGGAGATTTAGTTTATTTTCAGCTAGTTAGGATATGATACAGAGACATGAGTACTTGATGGAATAGTAATTGTAGCTAT
ATGTAAAGAATGAGAGACAGTAAGTATTTCGCTTATTCAAGTGGCGGTGATGTTGCGACCATGCTATACATGCTATAATGTTAGCTGCTGAAGTAAATAG
ACATATACTTGGTTTGTGTGAGTCAGACGAGACATTGACACTTACTTGTAATAATGAATAATAGTTTATACTGAGACATTGAAGGTGAGTCTTGTCTATT
CTAATACGGATTATGTTTGTTGTGAGTCACTGTATGTGATTTTTATGAATAGATTGATTGATTTCTGTAGGTGTATAGATTGTATTGATACATAAATCGA
ACAAAGATTGGTACGATGATTATCAAATGAGTGCGGTGCAATTAATGTAATTCGGTACTGAAAGATATTGATTGTTATGTATCTCACATTATTAGTTTAT
GAAGTAATGTTGATGAGTAATC
>LE_HBa0241N03_T7_403097 (trimmed for quality and cloning vector)
GA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.24113
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0241N03
Clone
Clone name
hba-241n3
LE_HBa0241N03
P241N03
Clone type
BAC
Contamination
none
Estimated length
97,849
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found