Clone Read LE_HBa0241N03_SP6_403095

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0241N03_SP6_403095
Primer
SP6
ID from Seq. Facility
LE_HBa_241_N03-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1607 raw
Sequence
>LE_HBa0241N03_SP6_403095 (raw untrimmed)
GAAGGGGGGAGAGGAGAAGAGGGACGAGAGGAAGAAGGAGGAAAAAGAAGAAAAAAGAAGAAAAAAGAGGAGGAGAGAGGGGGAGGAGCACCCCCGCGAA
AAAGAAGAGGGGGGAAGAGAAAGAAAGGACAAAGGAAGAAAGGGAGAGGAGAAGAGAGAGAAGGGGCAACGACCCACTAAAGAAAGAAAGGGGTGGAGGG
GGAGAGAAGAGGAGGAAGAGAAACGGAAGAAAAGAGAGAAGGAAAGAGGAAAGGAGGAGAGAAAGAAAGAGAGAAGAAGAGAAAAGCGGGGAGGAAGAAG
GGGGAGAAAAAGAAGGGGAAGAGAGAAACCACAAGAGAGAGGAGGAAGGAGAAAGAAAAGGGGGAAGAAGAGGAGGGAGAAGAAAAAAAAGAGAAGGAGA
GGAGAGAGGAGGAGAGAAAGAGAGGGAAAAAAAAAGAGGGGAAGGAGAGGAGAAAGAGAGGGAGGAGAAAGAGGAAAGAAAAGAAGAGGAAAAGGAAGAA
CAGAAGAGGAAGAGAAAGAGAAAGAAAGAGAGAGAGAGAGAAGAGAGAAGAGAGAGGACAGAAGGAGAAAAAAAGGGAGAAGGAGAGGAGGAAAAGAGGA
AAAGGGGGAGAGAAGAAAAGAGAGGGAGAAGAGGAAGAGGAAGAGGAGAAGAAAGGAAAAAGGAAGGAGGAAGGAGGAGAGGAAAAAAAAAGGGGGGAGA
GAAGGGGAAAAGAGGAGGAGAAAGAAAAAAGAGAAGAGGGAAGAAAAGGAGAAGAGGAGAAAGAAGAAGCGGAAAAAGCAAGAAGAGAAGGGAAGAGAGA
GAGAGAAGGAGAGAAGGAGAGAGAAAAGGGAGGAGAGGAAAAAAAAAGAAGAGAGGAAAGGAAAGAAGAGAGGAAGGGGAGAAGGAGGAAGAGGAAAAGA
GGGAAGAAGGGAAAGAAGGGGAGGAGAGGGAGAAAGAGGAAAGAAAAGGAGAGGAAGGAAAAAGAAGAGAGAAAAGGAGAAAAAAAAAGAAAAAAGAGGG
AGGGAGAGGGAGGAAAAAAAGAAAGAAGGAGGAAGAGAGAGAGAGGAGGAAGAGCGGGGAGAAGAGGGGAGGGAAGAAAAAAAAGAGGAGAGAAGAAGAG
AGAGAGGAGGGGGAAAGAGGGGAGAGAAAGAAAGAGAAAGAAGGAGAGGAGGGAGAAGAAGAGGGAGAGAGAGAAGAAATAGAGGAGGAAGGGAGAAAGA
AGGAGGAGGGAGAGAGGAAGAGGAAGAGAAAACGGGAGGGAAGGAAGGAGATGAAAAAGAAAGAGAAAAGAGAAGGAGAGGGAGAAGGGGAAGGAGGAAG
AAAAGGAAGGGGGAGAAGGGAAAGAGGAAGAAGAAGAGGAGAAGGGGAAAGGAAGGAAGAGGGGGGGAGAGAGAGGAAGAGGAGGAGGAAAGAGAGAGGA
AAAAAAGGGAGGAAAGAAGAAGAGGAAAGAGGAGGAAAAAGGAGAGGAGGAAAGGAAGAGAGGGAGAAAAGGAGGAGAGAGGAGAGGAGGAGAAAGCGAA
GAGAAGGAAGGGAAGAGAAAAAAAAGAGGAGAAGAGAGAGGAAGAGAAAGAGGGAAGGGAAGGAAGAGAGAGAGAAGAGGGCAGAGAAGAAAGAGAAAAG
AGAAGAG
>LE_HBa0241N03_SP6_403095 (trimmed for quality and cloning vector)
GAGAGA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.03177
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0241N03
Clone
Clone name
hba-241n3
LE_HBa0241N03
P241N03
Clone type
BAC
Contamination
none
Estimated length
97,849
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found