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Clone Read LE_HBa0117L07_SP6_40092

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0117L07_SP6_40092
Primer
SP6
ID from Seq. Facility
LE_HBa_117_L07-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
790 trimmed for vector and quality, 961 raw
Genbank Accession
Sequence
>LE_HBa0117L07_SP6_40092 (raw untrimmed)
CCCGGCTTGCTTCTTGAGTGTCACTCAACGGAGGAGAAGCAAGACAGAAATCAGAAAAACTAANTCTGAGAGGAAACAATCTAAGCAGTAAAATGCATTA
TACAATATCTTCTGGTATACAAAAATGCTGAAGTGACCATCTCATTCAAAAGCTTAAGTTGTTAGAGCGACCGCATACTTTAATCACTTAATATCCTCTT
TCCTAATTTATGTGGCACGCTTTTTAGTCAATCCAAAAAAAATGTCACCTTTTGATATTAGAACATAATTTAAACTTCAGAATTCTCATTTTACTCTTAA
TGAGATTACTTATAGTCAACAAATGTCTAAGGCACATTAGACGACAAGTTTCAAAAGTCTTTATTTCTTTCTTAAATTGTCACACCATGATTTATATAGG
TTAAAACACAATTCAGTAAATCAAACAATGGCCTCTGTAATAGATTAAACTTTAGATAAGATGATCACACTTTAATATGGTATCAGCGCAAGAAGAGACA
TGGATTCAAGTCCCACAGTTACCAATTAGCAAAAGGAATTTTCACGTAATGTGCCCAACAGAAAAGAATTAGGATGGCATGTGAGAAGGCATGCTAGAAA
TATAATCAAGTATGGTAAAGTGTGACTCTGTAATAGCATAAAAATTTCAGATTAGATGGTCAAACAAATCAACAATATGGATATTTAAAAAGGTTTTCCC
TATAAAAGATAAAATATAAAAAGGTCAAAACATAATTTTGTTTTTCAATTAGAGCATATAAAATTTAAACCAGTAGAGGTTTAAAAGCACCCTACGTATA
TAGCTTGATTACTAACTCGGGAAATTAAGAAATAATATTAATAATATCATTAGGATACAGATAAGACCGCGACCTTGCGTGCTTCTGTATCTTTCCAGAC
TTTCCCGCAATACCCAAAAAAAAACAACACTATCTGAAAACAAAATTTGACCCGTCAATTG
>LE_HBa0117L07_SP6_40092 (trimmed for quality and cloning vector)
ACGGAGGAGAAGCAAGACAGAAATCAGAAAAACTAANTCTGAGAGGAAACAATCTAAGCAGTAAAATGCATTATACAATATCTTCTGGTATACAAAAATG
CTGAAGTGACCATCTCATTCAAAAGCTTAAGTTGTTAGAGCGACCGCATACTTTAATCACTTAATATCCTCTTTCCTAATTTATGTGGCACGCTTTTTAG
TCAATCCAAAAAAAATGTCACCTTTTGATATTAGAACATAATTTAAACTTCAGAATTCTCATTTTACTCTTAATGAGATTACTTATAGTCAACAAATGTC
TAAGGCACATTAGACGACAAGTTTCAAAAGTCTTTATTTCTTTCTTAAATTGTCACACCATGATTTATATAGGTTAAAACACAATTCAGTAAATCAAACA
ATGGCCTCTGTAATAGATTAAACTTTAGATAAGATGATCACACTTTAATATGGTATCAGCGCAAGAAGAGACATGGATTCAAGTCCCACAGTTACCAATT
AGCAAAAGGAATTTTCACGTAATGTGCCCAACAGAAAAGAATTAGGATGGCATGTGAGAAGGCATGCTAGAAATATAATCAAGTATGGTAAAGTGTGACT
CTGTAATAGCATAAAAATTTCAGATTAGATGGTCAAACAAATCAACAATATGGATATTTAAAAAGGTTTTCCCTATAAAAGATAAAATATAAAAAGGTCA
AAACATAATTTTGTTTTTCAATTAGAGCATATAAAATTTAAACCAGTAGAGGTTTAAAAGCACCCTACGTATATAGCTTGATTACTAACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.936991
Expected error %
0.411354
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0117L07
Clone
Clone name
hba-117l7
LE_HBa0117L07
P117L07
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found