Clone Read LE_HBa0238P09_T7_399492

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238P09_T7_399492
Primer
T7
ID from Seq. Facility
LE_HBa_238_P09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
549 trimmed for vector and quality, 872 raw
Sequence
>LE_HBa0238P09_T7_399492 (raw untrimmed)
NNTTACTGTCGGGGATCTCTGAGTGACCTGCAGGCATGCAAGCTTGTGAGAAAACTTATACCCTTTTTTGAGGAGGTTGACTACTGCCCCAATTTTGACT
TTATCGGAAGGTACTCAAGGTTTTATGGTGTATTATGATGCATCTACAATTGGTTTGGGCTGCGTATTAATGCAGAATGATAAAGTTATAGCTTATGGAT
CTAGACAGTTGAAGATATATGAGAAAATTACCCAACCAATGACTTAGAGTTGGTTGTCGTAGTATTTGCTTTAAAGATATGACATCATTATTTGTATGGT
GTGCACGTAGATGTGTTCACCAGTCACAAGAGCCTTCAGTATGTGTTTACTCAGCTAGAGCTTAGTCTCAGACAAAGGAAGTGTTGGAGTTACTCAAGGA
TTATGACATTAGTATTCTTTACCACTCAGACAAGGTTAATGTTGTTGTTGATGCCTTGAGCATGTTGTTTATGGGTAGTACCACCCATTTTGAGAAAGAG
AAGAAAGAACTAGCAAAAGATGTGCATAGACTTGCATGCTTACGAGTCTGACTAATAGATTCCACAAAAGGAGGAGTGGTGGTGATGATTGGAGTTGAAT
CATCATTAGTGTCAAAAGTAAAAGACAAGCAAGACCAAGACCCCATTTTGCTTAAATTGAACGCAAGTGTCCATAAGCAAAAAGTAATGACTTTTGAACA
ACGGGGAGATGGTGTGTTTAAGTACCCAGGTACATTGTGGGTGCCTTAGGGTGGAATAAATCCAAGTCAAAATCCGGGCAGAAGCCCCATAATTCAAAAT
AGTCAATTCAGCCAAATTCTACAAAAATTGGTCCGTATTTGAAAAAGTTTTTTTGTTGGAAATACTATGAAC
>LE_HBa0238P09_T7_399492 (trimmed for quality and cloning vector)
GGTTGACTACTGCCCCAATTTTGACTTTATCGGAAGGTACTCAAGGTTTTATGGTGTATTATGATGCATCTACAATTGGTTTGGGCTGCGTATTAATGCA
GAATGATAAAGTTATAGCTTATGGATCTAGACAGTTGAAGATATATGAGAAAATTACCCAACCAATGACTTAGAGTTGGTTGTCGTAGTATTTGCTTTAA
AGATATGACATCATTATTTGTATGGTGTGCACGTAGATGTGTTCACCAGTCACAAGAGCCTTCAGTATGTGTTTACTCAGCTAGAGCTTAGTCTCAGACA
AAGGAAGTGTTGGAGTTACTCAAGGATTATGACATTAGTATTCTTTACCACTCAGACAAGGTTAATGTTGTTGTTGATGCCTTGAGCATGTTGTTTATGG
GTAGTACCACCCATTTTGAGAAAGAGAAGAAAGAACTAGCAAAAGATGTGCATAGACTTGCATGCTTACGAGTCTGACTAATAGATTCCACAAAAGGAGG
AGTGGTGGTGATGATTGGAGTTGAATCATCATTAGTGTCAAAAGTAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949334
Expected error %
0.379378
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238P09
Clone
Clone name
hba-238p9
LE_HBa0238P09
P238P09
Clone type
BAC
Contamination
none
Estimated length
83,247
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found