Clone Read LE_HBa0238P09_SP6_399490

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238P09_SP6_399490
Primer
SP6
ID from Seq. Facility
LE_HBa_238_P09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
497 trimmed for vector and quality, 829 raw
Sequence
>LE_HBa0238P09_SP6_399490 (raw untrimmed)
CTCTAAGACCATAGGACTAATAAAATCAAATTTATAATGGTTCAACCTTTAAGGGGGNANNGNNNTNAGNTNNANNAANTAGNAATGTCTTTAAGAATTC
TATGAATTTTTACG
TAAGTGACTATTCATTAGATTCAACTTTTTTCATATATTCATTTTATCTCCTAAAGAATTAGTCACATCTGTTTGAAGTAATGCCT
GGAGTTTTTTTCCTTCTTTACATCAACATATTTCTTCATTTCTTCCCTTACAGCATTGGGGCATTGTTCACAGCATGAGACGTCCATGCAAGTACCAATG
AGGAGTTGTTTATGACGAAAGATTCCTCCATTATTAACTTTTTTTACAAAATTTACACTCAACTGGCGGACTTATTGGTCTTACTTGTTCTTTTCCAATA
TTTCCAACCCGGGTCTTTTGTTTTGAATAGCTTTTAAGATCTTTTATATAATAAAAAAGATAAACATAGCAATTGAAGTAAAAATTATTAGTAAAAATGA
AGATTAAAATATTATGCCAGTACTACTAAATGAAGAGAAGATGAGAAAGGGAGAATAGAACACGACTACCTACTATACTTACATACACCAACAAAGTATT
TGTAAAGAGAGATCACTAATCAATTTCAACTACTTCAAAGGACCTGTTAAGAAACTTGAGCATATATTTGGACTTGAAACACTACTCTATATGCTTAAGG
TAATACTTCTTGTTTATCCATTATAGAATTGTGAATAGTTTAAGATTTTTCCTTTTCGCTTTTGATGATAAACTTAGTATTTTTTTTGTTTCTAATGGGT
TATTGATGGAATATTATTACTTGTTTGGN
>LE_HBa0238P09_SP6_399490 (trimmed for quality and cloning vector)
TAAGTGACTATTCATTAGATTCAACTTTTTTCATATATTCATTTTATCTCCTAAAGAATTAGTCACATCTGTTTGAAGTAATGCCTGGAGTTTTTTTCCT
TCTTTACATCAACATATTTCTTCATTTCTTCCCTTACAGCATTGGGGCATTGTTCACAGCATGAGACGTCCATGCAAGTACCAATGAGGAGTTGTTTATG
ACGAAAGATTCCTCCATTATTAACTTTTTTTACAAAATTTACACTCAACTGGCGGACTTATTGGTCTTACTTGTTCTTTTCCAATATTTCCAACCCGGGT
CTTTTGTTTTGAATAGCTTTTAAGATCTTTTATATAATAAAAAAGATAAACATAGCAATTGAAGTAAAAATTATTAGTAAAAATGAAGATTAAAATATTA
TGCCAGTACTACTAAATGAAGAGAAGATGAGAAAGGGAGAATAGAACACGACTACCTACTATACTTACATACACCAACAAAGTATTTGTAAAGAGAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.932967
Expected error %
1.1313
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238P09
Clone
Clone name
hba-238p9
LE_HBa0238P09
P238P09
Clone type
BAC
Contamination
none
Estimated length
83,247
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found