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Clone Read LE_HBa0222K23_T7_399421

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222K23_T7_399421
Primer
T7
ID from Seq. Facility
LE_HBa_222_K23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
645 trimmed for vector and quality, 944 raw
Sequence
>LE_HBa0222K23_T7_399421 (raw untrimmed)
GTGATGCGGGGACTCTGAGTGACCGNAGGCATGCAAGCTTAGGTTTTGATATAACAAATAGCTTTGACAGCGGTTATACAAAATGAAACCTCATCTATAG
ATAATACTCCCAATCCCTTTATACATATAATCACAATTTTTAAAGCTAAAATCTCTCCAAACTGGAAATGACCTCATGTAAAACATGAAATGGTGTAACA
GACGGCGATGAACGAGTGAGATGCATTTGGAAGATAATCAAGTATAAGAGCTTAAGAAATTTTGTTCAGAAAGTGCATAATTATATTAGTTAAGAACTTC
AAGTAGCTTATCAAAAATAAATTTAAAAAATTAAGCTATTAATGTTTATGTCAAACAATGGAATGGTGCAAAGGGATTTAATATATTTCAGGAAAGCATT
TTGTGCATACAAATAAAAAAAATTTAGATAGAAGAGTCACCAGCTGCACTTTCTGAATCTTCTGTCCAAATTTGGTCTTTGAATTCCCGTTCCTTCCTGA
ACCGACTTGGTCTAGATTTTGAACAGAAAAGAAATATACAAGTTCTGGCATATCAATCACGGATGACCTATAAAAGAGAAATGCAGAGAAGTAAATGAGA
CATTTTACTCTTGAAAAAAGGAGTTGACCACATGGGTGCATTAACAATATATCCAAAACCTACTTGGATGCATAGCTACATTTTTCAATTTCAGCCCCAA
AAACTTCCTTGGACTGCTCTACTAATCTTTTAACCAATGCAATGGGCTTCAGCTTTCTTAGTTGAATTGCTTTCTTGAAGTCATAGTGCTAAGACAAATT
CCGTCCGGTAATTTTTTTCTAGGTGGAAGAACCAATAAGAAGGGTTTGGAGATGGGAAAACCAGGCTAATTTATTCACCTTAAGGAAAAGAACCCGGAAG
AGGAGGGAAACGAAAGGAACCCTCTTTTTGGGAAATTGTTTATA
>LE_HBa0222K23_T7_399421 (trimmed for quality and cloning vector)
GCATGCAAGCTTAGGTTTTGATATAACAAATAGCTTTGACAGCGGTTATACAAAATGAAACCTCATCTATAGATAATACTCCCAATCCCTTTATACATAT
AATCACAATTTTTAAAGCTAAAATCTCTCCAAACTGGAAATGACCTCATGTAAAACATGAAATGGTGTAACAGACGGCGATGAACGAGTGAGATGCATTT
GGAAGATAATCAAGTATAAGAGCTTAAGAAATTTTGTTCAGAAAGTGCATAATTATATTAGTTAAGAACTTCAAGTAGCTTATCAAAAATAAATTTAAAA
AATTAAGCTATTAATGTTTATGTCAAACAATGGAATGGTGCAAAGGGATTTAATATATTTCAGGAAAGCATTTTGTGCATACAAATAAAAAAAATTTAGA
TAGAAGAGTCACCAGCTGCACTTTCTGAATCTTCTGTCCAAATTTGGTCTTTGAATTCCCGTTCCTTCCTGAACCGACTTGGTCTAGATTTTGAACAGAA
AAGAAATATACAAGTTCTGGCATATCAATCACGGATGACCTATAAAAGAGAAATGCAGAGAAGTAAATGAGACATTTTACTCTTGAAAAAAGGAGTTGAC
CACATGGGTGCATTAACAATATATCCAAAACCTACTTGGATGCAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.942507
Expected error %
0.138946
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222K23
Clone
Clone name
hba-222k23
LE_HBa0222K23
C12HBa0222K23
P222K23
Clone type
BAC
Contamination
none
Estimated length
93,074
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found