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Clone Read LE_HBa0222K23_SP6_399419

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222K23_SP6_399419
Primer
SP6
ID from Seq. Facility
LE_HBa_222_K23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
686 trimmed for vector and quality, 915 raw
Sequence
>LE_HBa0222K23_SP6_399419 (raw untrimmed)
NGGCAGTTTGTGACGTCAGATCTGATCCTTTTTGTTGGTGAGGCACTTGTTGGAAATGACGCTGTTGATCAGTTATCAAAGTTCAACCAGGTTTGCCTAT
AATGGTGATGATAACTTCCCCATAATTTTAACGTTTGTTCCATAATTGACACATTCTCTTATATCTGCAGAAACTAGGTGACCTTTCACCCTCACCAAAT
CCAAGATTGATTGATGGAATTCTCCTTACCAAGTTTGACACCATTGATGATAAGGTACACACAGTCATGGTCTTTTCGCATTAACAAGTTTGATGCCAGC
CTATGCTACTTTACCGAGTTAATGTTTTTTCTTCCTACTTATTTGATTATCATTCTGATATCAACAATCAAATGTCAAAATATATTTCAGTCACGTTAGC
ATGTTTACTTTAGGTCCTATGATTTCTACTCATATCAGATATATACCGGTAGAAAATAGAGAGGATTTCTAGTACATTTATCTACCTTATTTTTGAACGA
TATTGGCTTGAGACAACCTTAAATGGAGCGACAGGATTCACATAGTCGATTCCCACTTTGAGTTTGAAATCAAAGTATAGTAGTTAGTGTTGTTGTGTAT
TCTTATAGTCAGCGTTTTCTGCAGGTGGGAGCAGCGTTGTCCATGGTTTACATATCTGGAGCCCCGGTCATGTTTGTGGGATGTGGTCAGTCTTACACAG
ACTTGAAGAAGCTGAATGTCAAGTCCATAGTGAAGAACCTCCTCAAATGAGAACACACAATCTGCCTCTACATTTCAGTTTGGCTTGTAATGTCTGTTTA
AGAAAGTGTTGACACTTTTGGCTGTTGCTGCTTCAGTTCCGTTTGGAACTCTGGATTCACTCATCTGTGATTTAAACTATTTTGAATTTGAAGGTGAACA
TTTGACTTAATTGGG
>LE_HBa0222K23_SP6_399419 (trimmed for quality and cloning vector)
TCTGATCCTTTTTGTTGGTGAGGCACTTGTTGGAAATGACGCTGTTGATCAGTTATCAAAGTTCAACCAGGTTTGCCTATAATGGTGATGATAACTTCCC
CATAATTTTAACGTTTGTTCCATAATTGACACATTCTCTTATATCTGCAGAAACTAGGTGACCTTTCACCCTCACCAAATCCAAGATTGATTGATGGAAT
TCTCCTTACCAAGTTTGACACCATTGATGATAAGGTACACACAGTCATGGTCTTTTCGCATTAACAAGTTTGATGCCAGCCTATGCTACTTTACCGAGTT
AATGTTTTTTCTTCCTACTTATTTGATTATCATTCTGATATCAACAATCAAATGTCAAAATATATTTCAGTCACGTTAGCATGTTTACTTTAGGTCCTAT
GATTTCTACTCATATCAGATATATACCGGTAGAAAATAGAGAGGATTTCTAGTACATTTATCTACCTTATTTTTGAACGATATTGGCTTGAGACAACCTT
AAATGGAGCGACAGGATTCACATAGTCGATTCCCACTTTGAGTTTGAAATCAAAGTATAGTAGTTAGTGTTGTTGTGTATTCTTATAGTCAGCGTTTTCT
GCAGGTGGGAGCAGCGTTGTCCATGGTTTACATATCTGGAGCCCCGGTCATGTTTGTGGGATGTGGTCAGTCTTACACAGACTTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.966072
Expected error %
0.103598
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222K23
Clone
Clone name
hba-222k23
LE_HBa0222K23
C12HBa0222K23
P222K23
Clone type
BAC
Contamination
none
Estimated length
93,074
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found